DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab21 and RABE1e

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_187601.1 Gene:RABE1e / 820148 AraportID:AT3G09900 Length:218 Species:Arabidopsis thaliana


Alignment Length:223 Identity:75/223 - (33%)
Similarity:128/223 - (57%) Gaps:13/223 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSRTRNGPTLNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQL 65
            ::.:|.|:......|.:|:|:..|||:.|:||:.:|.|....::|:...|..|.:.| ||:|.:|
plant     3 VAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVEL-DGKRIKL 66

  Fly    66 NIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTD 130
            .||||||||||..:...||||:.|.|||||:||..||..:::|::.:.|.....:..|:||||.|
plant    67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKAD 131

  Fly   131 LEE-QRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASP--LRLQ 192
            ::| :|||...:....|...|.::.|||||.|:.|.::|..:.:.:.::|::....|.|  :::.
plant   132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQGIKIT 196

  Fly   193 NPDTDNLNNSDDSEAPDPGDPAGQRSCC 220
            ..|.:..::|..:|         :.:||
plant   197 KQDANKASSSSTNE---------KSACC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 65/162 (40%)
RABE1eNP_187601.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 65/167 (39%)

Return to query results.
Submit another query.