DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and rab31

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_697248.2 Gene:rab31 / 568800 ZFINID:ZDB-GENE-140106-13 Length:194 Species:Danio rerio


Alignment Length:207 Identity:82/207 - (39%)
Similarity:122/207 - (58%) Gaps:20/207 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRA-QLNIWDTAGQERFHA 78
            |..|||:..|||:|:|.|:::|.|:.....|:.|||:::  ::..|... :..|||||||||||:
Zfish     7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTK--TVPSGNELHKFLIWDTAGQERFHS 69

  Fly    79 LGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 143
            |.|:|||||..|::|||||..||||.:|.||:||::....:|.:.|.|||.||.:.|.|...||.
Zfish    70 LAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPTKEAK 134

  Fly   144 QYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSDDSEAP 208
            ::|.::.|.::||||:....:.|||        :::|::.|.     |:|.|.|    |.||...
Zfish   135 EFAESIAAIFMETSARNAVNIEELF--------QKISRQIPP-----LENTDAD----SHDSFKL 182

  Fly   209 DPGDPAGQRSCC 220
            ....|...:.||
Zfish   183 TRQPPPATKRCC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 70/161 (43%)
rab31XP_697248.2 Rab5_related 5..167 CDD:206653 71/169 (42%)

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