DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and zgc:100918

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001005591.1 Gene:zgc:100918 / 449549 ZFINID:ZDB-GENE-040927-2 Length:205 Species:Danio rerio


Alignment Length:189 Identity:71/189 - (37%)
Similarity:112/189 - (59%) Gaps:11/189 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHAL 79
            |.::||:..||||||:.:|:..:|:.|:.:|:.|.|:::::.::| |...:.||||||||||.:|
Zfish    10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD-RLVTMQIWDTAGQERFQSL 73

  Fly    80 GPIYYRGSDGALLVYDITDRDSFQKVKSWVREL---RQMRGTE-IALIIVGNKTDLEEQRAVTHD 140
            |..:|||:|..:||||:|..::|:.:.||..|.   ...|..| ...:::|||.|| |.|.||..
Zfish    74 GVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL-ENRQVTTK 137

  Fly   141 EALQYART-VGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQ----PDASPLRLQNP 194
            .|..:.:: ....|.||||||...|.:.|:.:.:..|:|.|:.:    ||...||...|
Zfish   138 RAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQESEVETYDFPDQIKLRDDRP 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 63/165 (38%)
zgc:100918NP_001005591.1 Rab7 9..179 CDD:206655 65/170 (38%)

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