DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and rab10

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001002566.1 Gene:rab10 / 436839 ZFINID:ZDB-GENE-040718-304 Length:201 Species:Danio rerio


Alignment Length:210 Identity:71/210 - (33%)
Similarity:120/210 - (57%) Gaps:18/210 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERF 76
            |.||.:|:|:..||||.::.|:.:|.||...:||:...|..:.:.|: |::.:|.||||||||||
Zfish     8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ-GKKIKLQIWDTAGQERF 71

  Fly    77 HALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDE 141
            |.:...||||:.|.:||||||:..||:.:..|:|.:.:....::..:::|||.|:|::|.|...:
Zfish    72 HTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAK 136

  Fly   142 ALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSDDSE 206
            ..|.|:..|.::.|||||.|..:.:.|..|.:.:|::...::|                ||::.:
Zfish   137 GEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEP----------------NSENVD 185

  Fly   207 APDPGDPAGQRS-CC 220
            ....|...|.:: ||
Zfish   186 ISTGGGVTGWKTKCC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 62/161 (39%)
rab10NP_001002566.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 64/165 (39%)

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