DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and Rab26

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster


Alignment Length:170 Identity:59/170 - (34%)
Similarity:100/170 - (58%) Gaps:7/170 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KAVLLGEGCVGKTSLVLRYMEDRFNAQH-LSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHA 78
            |.::||:..||||||::|:.:.|:...: |||:...| ..|:.:.||.|.:|.||||||||||.:
  Fly   214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDF-RNKVVVVDGTRVKLQIWDTAGQERFRS 277

  Fly    79 LGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLE-EQRAVTHDEA 142
            :...|||.:...||:||:|::.::..:::|:.|:|:....::.::::|||.|.. .:|.|..::.
  Fly   278 VTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDG 342

  Fly   143 LQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQR 182
            .:..|.....::|||||....|    ||....:..||..|
  Fly   343 ERLGREHNVPFMETSAKTGLNV----ELSFTAVARQLKSR 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 56/162 (35%)
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 59/170 (35%)

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