DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and RAB19

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001008749.2 Gene:RAB19 / 401409 HGNCID:19982 Length:217 Species:Homo sapiens


Alignment Length:193 Identity:62/193 - (32%)
Similarity:107/193 - (55%) Gaps:13/193 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHA 78
            ||.:|:|:..||||.:|..:....:.....:|:...|..|.:.: ||::.::.:|||||||||..
Human    18 FKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDI-DGKKVKMQVWDTAGQERFRT 81

  Fly    79 LGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 143
            :...|||.:..|::.||:|.|.:|:.:..|:.|:.:.....:.::::|||.||.|:|.|..::|.
Human    82 ITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDAC 146

  Fly   144 QYARTVGAQYV-ETSAKENEGVAELFELLTQLMLEQ----------LSQRQPDASP-LRLQNP 194
            ..|...|...| ||||||::.:.|:|.|:.:.::.:          |:....|:|| |..|.|
Human   147 TLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGESALNGLPLDSSPVLMAQGP 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 55/162 (34%)
RAB19NP_001008749.2 Rab19 15..179 CDD:133267 55/161 (34%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 1/14 (7%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 8/14 (57%)

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