DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and rab35

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_989019.1 Gene:rab35 / 394615 XenbaseID:XB-GENE-489018 Length:201 Species:Xenopus tropicalis


Alignment Length:211 Identity:74/211 - (35%)
Similarity:124/211 - (58%) Gaps:22/211 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHA 78
            ||.:::|:..|||:||:||:.::.|:..:::|:...|..|.:.: :|.:.:|.||||||||||..
 Frog     9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI-NGEKVKLQIWDTAGQERFRT 72

  Fly    79 LGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 143
            :...||||:.|.::|||:|..:||..||.|:.|:.| ...::..|:||||.|..|::.|..::|.
 Frog    73 ITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVGNKNDDPERKVVETEDAY 136

  Fly   144 QYARTVGAQYVETSAKENEGVAELFELLTQLML----EQLSQRQPDASPLRLQNPDTDNLNNSDD 204
            ::|..:..|..|||||||..|.|:|..:|:|:|    :.|:::|        |....|.:..|.:
 Frog   137 KFAAQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNLAKQQ--------QQQQNDVVKLSKN 193

  Fly   205 SEAPDPGDPAGQRSCC 220
            |:.        ::.||
 Frog   194 SKR--------KKRCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 65/161 (40%)
rab35NP_989019.1 Rab35 3..201 CDD:133310 72/209 (34%)

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