DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and Rab9

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster


Alignment Length:235 Identity:74/235 - (31%)
Similarity:109/235 - (46%) Gaps:37/235 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHAL 79
            |.|:||:|.|||::|:.|::.:|:...:..|:...|:::.: :.||.|..|.||||||||||.||
  Fly    14 KVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDI-VVDGERYTLQIWDTAGQERFRAL 77

  Fly    80 GPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTE---IALIIVGNKTDLEEQRAVTHDE 141
            ...:|||||..||.|.:.||||.:.:..|..|.......:   ...|:||||.|:..|:.....:
  Fly    78 RTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKRQVSSD 142

  Fly   142 ALQY--ARTVGAQYVETSAKENEGVAELF----------ELLTQLMLEQLSQRQPDASPLRL--- 191
            |:|.  |....|.::|||:|....|.:.|          |.:.:..|.|.........|:||   
  Fly   143 AVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVAEAELRQHGDTIDLTRPIRLVQR 207

  Fly   192 -------------QNPDTDNLNNSDDSEAPDPGDPA-GQR 217
                         ...|.|    .||:....||... ||:
  Fly   208 RICCTGGGGGGGGVGQDAD----GDDAAMHSPGKKVFGQK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 61/175 (35%)
Rab9NP_609966.1 Rab9 8..178 CDD:206697 60/164 (37%)

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