DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and Rab6

DIOPT Version :9

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001285869.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster


Alignment Length:228 Identity:85/228 - (37%)
Similarity:128/228 - (56%) Gaps:29/228 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSRTRNGPTLNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQL 65
            |||....| |...||.|.|||..||||||:.|:|.|.|:..:.:|:...|:|:.|.||| |..:|
  Fly     1 MSSGDFGN-PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLED-RTVRL 63

  Fly    66 NIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTD 130
            .:|||||||||.:|.|.|.|.|..|::|||||:.:||.:...|:.::|..||:::.:::||||||
  Fly    64 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 128

  Fly   131 LEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPD 195
            |.::|.|:.:|..:.|:.:...::|||||....|.:||..:...:                  |.
  Fly   129 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL------------------PG 175

  Fly   196 TDNLNN--SDD------SEAP-DPGDPAGQRSC 219
            .|:..|  |:|      .::| :..||.|..:|
  Fly   176 MDSTENKPSEDMQEVVLKDSPNETKDPEGGCAC 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 70/161 (43%)
Ras 15..177 CDD:278499 69/161 (43%)
Rab6NP_001285869.1 Rab6 13..173 CDD:206654 70/160 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454185
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24073
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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