DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and Rab39

DIOPT Version :9

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001245568.1 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster


Alignment Length:164 Identity:62/164 - (37%)
Similarity:96/164 - (58%) Gaps:4/164 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHA 78
            |:.:|:|:..|||:||:..:.:.:|......|:...|.:|.:.::||.:.:|.:|||||||||.:
  Fly    10 FRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFRS 74

  Fly    79 LGPIYYRGSDGALLVYDITDRDSFQKVKSWVREL-RQMRGTEIALIIVGNKTDLEE---QRAVTH 139
            :...|||.|.|.||||||::..||:.:..|:.|. |.:........:||.|.||..   .|.||.
  Fly    75 ITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHREVTT 139

  Fly   140 DEALQYARTVGAQYVETSAKENEGVAELFELLTQ 173
            :||.::|:..|..:|||||:....|.|.|.::||
  Fly   140 EEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQ 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 62/164 (38%)
Ras 15..177 CDD:278499 61/163 (37%)
Rab39NP_001245568.1 Rab39 8..218 CDD:133311 62/164 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454504
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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