DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and RAB12

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001020471.3 Gene:RAB12 / 201475 HGNCID:31332 Length:340 Species:Homo sapiens


Alignment Length:227 Identity:75/227 - (33%)
Similarity:122/227 - (53%) Gaps:23/227 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RTRNGP--TLNFK--AVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQL 65
            |.|..|  ..:||  .:::|...||||||:.|:.:|.|.....||:...|..:.:.|. |::.:|
Human   126 RRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR-GKKIRL 189

  Fly    66 NIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTD 130
            .||||||||||:::...|||.:.|.:||||||.:::|..:..|::.:.:....:..|::||||.|
Human   190 QIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLD 254

  Fly   131 LEEQRAVTHDEALQYARTV-GAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNP 194
            .|..|.:|..:..::|:.: |.::.|.|||:|..|.|:|..|...:|:::        ||.:.. 
Human   255 CETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM--------PLDILR- 310

  Fly   195 DTDNLNNSDDSEAPDP------GDPAGQRSCC 220
              :.|:||..|..|:|      ..|.....||
Human   311 --NELSNSILSLQPEPEIPPELPPPRPHVRCC 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 60/164 (37%)
RAB12NP_001020471.3 Rab12 139..340 CDD:206699 68/212 (32%)

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