DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab21 and RabX1

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_316217.3 Gene:RabX1 / 1276825 VectorBaseID:AGAMI1_002888 Length:242 Species:Anopheles gambiae


Alignment Length:182 Identity:77/182 - (42%)
Similarity:123/182 - (67%) Gaps:2/182 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHAL 79
            |.|:||...|||||||:||:.:.:..:...|:.|||.:.|::||| .:.::.:|||||||||.|:
Mosquito     7 KIVVLGSQGVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLED-FKVKMQVWDTAGQERFKAM 70

  Fly    80 GPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEALQ 144
            .|:|||.::.||||:|:|..:||.::|.||:||::.....:.|.:||||.|||.:|||:.:||:.
Mosquito    71 APLYYRNANAALLVFDLTQYNSFNEIKGWVQELQRNVQEPMVLSLVGNKLDLEAKRAVSREEAML 135

  Fly   145 YARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDT 196
            ||.::|..|.||||..::|:.::| :...:.|.:||.....:|..|.::.|:
Mosquito   136 YANSIGGNYFETSALHDQGIEQVF-ISIAVGLIKLSGEDVCSSLKRYESNDS 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 71/160 (44%)
RabX1XP_316217.3 Rab 7..163 CDD:206640 71/157 (45%)

Return to query results.
Submit another query.