DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40486 and NYC1

DIOPT Version :10

Sequence 1:NP_001036311.2 Gene:CG40486 / 3355162 FlyBaseID:FBgn0263830 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_567400.1 Gene:NYC1 / 826942 AraportID:AT4G13250 Length:496 Species:Arabidopsis thaliana


Alignment Length:225 Identity:59/225 - (26%)
Similarity:109/225 - (48%) Gaps:33/225 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RVAVVTGASSGIGAAVARHLVSAGVIVVGLARRVDRMKAIKEQLPPELQ---------------- 55
            |..|:||::.|:|.|:||..:.:|..|:..:|..:.:....::|...|:                
plant   162 RNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSD 226

  Fly    56 GRLHAIHCDV---EDLDSVTAAFDWIEEQLGGCDILVNNAGCLNPG--QLLTLELEQLQQVLNVN 115
            .::..|.|||   ||::.::   ::..::||..:|.:|||| .|.|  .||....|.:.|:::.|
plant   227 AKVVGIACDVCKPEDVEKLS---NFAVKELGSINIWINNAG-TNKGFRPLLEFTEEDITQIVSTN 287

  Fly   116 LMGVVICTRRAFRSMQQREVDGHVILINSLTGRNIINPPGDELQVLNMYPLTKHGVTAMLEVLRQ 180
            |:|.::|||.|...|.::...||:..::.      ....|....:..:|..||.|:......:.:
plant   288 LIGSILCTRGAMDVMSRQHSGGHIFNMDG------AGSGGSSTPLTAVYGSTKCGLRQFHGSIVK 346

  Fly   181 ELRGFKTKIKVTSITPGVTDTEILPSGYGI 210
            |.:  ||.:.:.:.:||:..||:|.||..|
plant   347 ESQ--KTNVGLHTASPGMVLTELLLSGSSI 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40486NP_001036311.2 Rossmann-fold NAD(P)(+)-binding proteins 1..242 CDD:473865 59/225 (26%)
NYC1NP_567400.1 SDR_c 164..395 CDD:212491 58/223 (26%)

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