DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40486 and HSD5

DIOPT Version :10

Sequence 1:NP_001036311.2 Gene:CG40486 / 3355162 FlyBaseID:FBgn0263830 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_192740.1 Gene:HSD5 / 826593 AraportID:AT4G10020 Length:389 Species:Arabidopsis thaliana


Alignment Length:215 Identity:55/215 - (25%)
Similarity:86/215 - (40%) Gaps:37/215 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ERWHDRVAVVTGASSGIGAAVARHLVSAGVIVVGLARRVDRMKAIKEQLPPELQGRLHAIHCDVE 66
            |...|:|.|:|||||.||..:|......|..:|.:|||..|::.:..:........:..|..||.
plant    45 ENMEDKVVVITGASSAIGEQIAYEYAKRGANLVLVARREQRLRVVSNKAKQIGANHVIIIAADVI 109

  Fly    67 DLDS----VTAAFDWIEEQLGGCDILVNNAGCLNPGQLLTLELEQLQ------QVLNVNLMGVVI 121
            ..|.    :|.|.::    .|..|.|||.|...:     |...|::.      .:|::|..|.|.
plant   110 KEDDCRRFITQAVNY----YGRVDHLVNTASLGH-----TFYFEEVSDTTVFPHLLDINFWGNVY 165

  Fly   122 CTRRAFRSMQQREVDGHVILINSLTGRNIINPPGDE---LQVLNMYPLTKHGVTAMLEVLRQELR 183
            .|..|...:.|            ..||.::|...:.   |..:::|...|..:....|.||.||.
plant   166 PTYVALPYLHQ------------TNGRIVVNASVENWLPLPRMSLYSAAKAALVNFYETLRFELN 218

  Fly   184 GFKTKIKVTSITPGVTDTEI 203
            |   .:.:|..|.|...:|:
plant   219 G---DVGITIATHGWIGSEM 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40486NP_001036311.2 Rossmann-fold NAD(P)(+)-binding proteins 1..242 CDD:473865 55/215 (26%)
HSD5NP_192740.1 Rossmann-fold NAD(P)(+)-binding proteins 47..303 CDD:473865 54/213 (25%)
Extensin_2 343..>379 CDD:252669
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.