DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40486 and cbr4

DIOPT Version :10

Sequence 1:NP_001036311.2 Gene:CG40486 / 3355162 FlyBaseID:FBgn0263830 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_991219.3 Gene:cbr4 / 402954 ZFINID:ZDB-GENE-040426-1796 Length:237 Species:Danio rerio


Alignment Length:238 Identity:68/238 - (28%)
Similarity:112/238 - (47%) Gaps:34/238 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RVAVVTGASSGIGAAVARHLVSAGVIVVGLARRVDRMKAIKEQLPPELQGRLH-AIHCDVEDLDS 70
            |:|||.|.|.|||.||::.|...|..:|.|:|..:..:|..:.||    |..| .:.|||...:.
Zfish     3 RLAVVFGGSRGIGRAVSKLLAQRGHRIVLLSRNKEAAQATAQSLP----GENHLGLSCDVSKEEE 63

  Fly    71 VTAAFDWIEEQLGGCDILVNNAGCLNPGQLLTLELEQLQQVLNVNLMGVVICTRRAFRSMQQREV 135
            |..||:.|.:..|....|||.||......||..:.|.:..||:.||:|.::..:.|.|:|...  
Zfish    64 VQKAFETINKTCGTVGFLVNAAGINRDALLLRSKSEDMLSVLHTNLLGSMLTCKAAVRNMLSH-- 126

  Fly   136 DGHVILINSLTGRNIINPPGDELQVLNMYPLTKHGVTAMLEVLRQELRGFKTKIKVTSITPGVTD 200
            .|.::.|.|:.|     ..|:..|.  :|..:|.|:......|.:|:.  ...|:|..:.||:..
Zfish   127 GGAIVNIGSVVG-----VKGNAGQC--VYSASKAGLEGFTRSLAKEVA--SRNIRVNLVAPGLIH 182

  Fly   201 TEI------------LPSG-YGILPMLKPDDIAAGIMYVLGTP 230
            |::            :|.| :|     :|.::|..::::|.:|
Zfish   183 TDMTAGLVEEAAVRTIPLGRFG-----EPAEVAQAVLFLLESP 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40486NP_001036311.2 Rossmann-fold NAD(P)(+)-binding proteins 1..242 CDD:473865 68/238 (29%)
cbr4NP_991219.3 None

Return to query results.
Submit another query.