DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40486 and hsd17b1

DIOPT Version :10

Sequence 1:NP_001036311.2 Gene:CG40486 / 3355162 FlyBaseID:FBgn0263830 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_991147.3 Gene:hsd17b1 / 402842 ZFINID:ZDB-GENE-040901-5 Length:293 Species:Danio rerio


Alignment Length:234 Identity:67/234 - (28%)
Similarity:106/234 - (45%) Gaps:31/234 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RVAVVTGASSGIGAAVARHLVS---AGVIVVGLARRVDRMKAIKEQLPPELQGRLHAIHCDVEDL 68
            :|.::||.|||||.::|.||.|   ....|....|.:|:.:.:.|.:....:..|..:..||.|.
Zfish     4 KVVLITGCSSGIGLSLAVHLASNPAKAYKVYATMRNLDKKQRLLESVRGLHKDTLDILQMDVTDQ 68

  Fly    69 DSVTAAFDWIEEQLGGCDILVNNAGCLNPGQLLTLELEQLQQVLNVNLMGVVICTRRAFRSMQQR 133
            .|:..|...:.|  |..||||.|||....|.|.|..|:.::.:|:|||:| .|.|.:.|....::
Zfish    69 QSILDAQRNVTE--GRIDILVCNAGVGLMGPLETHSLDTIRAILDVNLLG-TIRTIQTFLPDMKK 130

  Fly   134 EVDGHVILINSLTGRNIINPPGDELQVL---NMYPLTKHGVTAMLEVLRQELRGFKTKIKVTSIT 195
            :..|.:::..|:.|          ||.|   .:|..:|..:....|.|...|:.|  .|.::.|.
Zfish   131 KRHGRILVTGSMGG----------LQGLPFNEVYCASKFAIEGACESLAILLQHF--NIHISLIE 183

  Fly   196 PGVTDTEILPSGYGILPMLKPDDIAAGIMYVLGTPAHVQ 234
            .|..:|:.|.:    |...:|.|      .||...||.:
Zfish   184 CGPVNTDFLMN----LKRTEPGD------KVLEVDAHTR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40486NP_001036311.2 Rossmann-fold NAD(P)(+)-binding proteins 1..242 CDD:473865 67/234 (29%)
hsd17b1NP_991147.3 None

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