DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40486 and Hsd17b1

DIOPT Version :10

Sequence 1:NP_001036311.2 Gene:CG40486 / 3355162 FlyBaseID:FBgn0263830 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_034605.1 Gene:Hsd17b1 / 15485 MGIID:105077 Length:344 Species:Mus musculus


Alignment Length:191 Identity:56/191 - (29%)
Similarity:81/191 - (42%) Gaps:42/191 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VAVVTGASSGIGAAVARHLVSAGVIVVGLARRVDRMKAIK--------------------EQLPP 52
            |.::||.|||||..:|..|.|            ||.::.|                    :..||
Mouse     5 VVLITGCSSGIGMHLAVRLAS------------DRSQSFKVYATLRDLKAQGPLLEAARTQGCPP 57

  Fly    53 ELQGRLHAIHCDVEDLDSVTAAFDWIEEQLGGCDILVNNAGCLNPGQLLTLELEQLQQVLNVNLM 117
               |.|..:..||.|..||.||...:.|  |..|:||.|||....|.|...||..:..||:||::
Mouse    58 ---GSLEILELDVRDSKSVAAAQACVTE--GRVDVLVCNAGRGLFGPLEAHELNAVGAVLDVNVL 117

  Fly   118 GVVICTRRAFRSMQQREVDGHVILINSLTGRNIINPPGDELQVLNMYPLTKHGVTAMLEVL 178
            | .|...:||....:|...|.|::..|:.|  ::..|..|:...:.:.|  .|:...|.:|
Mouse   118 G-TIRMLQAFLPDMKRRHSGRVLVTASVGG--LMGLPFHEVYCASKFAL--EGLCESLAIL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40486NP_001036311.2 Rossmann-fold NAD(P)(+)-binding proteins 1..242 CDD:473865 56/191 (29%)
Hsd17b1NP_034605.1 Rossmann-fold NAD(P)(+)-binding proteins 4..260 CDD:473865 56/191 (29%)

Return to query results.
Submit another query.