DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and RLP53

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_001332753.1 Gene:RLP53 / 832764 AraportID:AT5G27060 Length:958 Species:Arabidopsis thaliana


Alignment Length:882 Identity:212/882 - (24%)
Similarity:329/882 - (37%) Gaps:213/882 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 IDVSENGLRTFPLMALRKLDHLRILRLSNNRIPTFYGDIQLATNNAS------------AAAAAV 454
            :|:|.|..:.....::..|.||..|.||:|.   |.|.|..:..|.|            :..|..
plant   127 LDLSFNDFKGQITSSIENLSHLTYLDLSSNH---FSGQILNSIGNLSRLTYLNLFDNQFSGQAPS 188

  Fly   455 GAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNR 519
            ....|..|.|||||.|:|....|........|.|||.::|:.....|.:..:|..|.:||:|:|.
plant   189 SICNLSHLTFLDLSYNRFFGQFPSSIGGLSHLTTLSLFSNKFSGQIPSSIGNLSNLTTLDLSNNN 253

  Fly   520 IIGLDPKVFEKNKRLQTVDL-SHNHIHTIGGVFSNLPQLREVFLSENNILELPADAFTNSTNVDV 583
            ..|..|.......:|..:.| |:|.:..|...|.||.||..:::.:|.:.....:...|.|.:.:
plant   254 FSGQIPSFIGNLSQLTFLGLFSNNFVGEIPSSFGNLNQLTRLYVDDNKLSGNFPNVLLNLTGLSL 318

  Fly   584 IYLESNAIAHIDPNVFSTLVNLDHLYLRSN-FIPLLPVTLFDKSTKLTSLSLDNNEIQ-DLEIGM 646
            :.|.:|......|...::|.||.......| |....|..|| ....||.:.|:.|::: .||.|.
plant   319 LSLSNNKFTGTLPPNITSLSNLMDFDASDNAFTGTFPSFLF-TIPSLTYIRLNGNQLKGTLEFGN 382

  Fly   647 FRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQL 711
            .....:|.|:.:.||..       ..|:||         ||..: .:.|..  ::.|:|.|.   
plant   383 ISSPSNLYELDIGNNNF-------IGPIPS---------SISKL-VKLFRL--DISHLNTQG--- 425

  Fly   712 TVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRL 776
            .|...||     |.|...|:.|..|.                   |..||::.::|.        
plant   426 PVDFSIF-----SHLKSLLDLNISHL-------------------NTTTRIDLNYFL-------- 458

  Fly   777 YLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAK 841
                        ..|..|||   |||||                        ||:.|        
plant   459 ------------SYFKRLLL---LDLSG------------------------NHVSA-------- 476

  Fly   842 LKNLKSLDLSHNPLVQLTRDIFSN-----EFP--------LNSLNLGNCSLRKLEQHAFKSLTNL 893
             .|..|:.   :|..||.:.::.:     |||        |..|::.|..::.........|..|
plant   477 -TNKSSVS---DPPSQLIQSLYLSGCGITEFPEFVRTQHELGFLDISNNKIKGQVPDWLWRLPIL 537

  Fly   894 NELNLERNQLNPADIQTLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSL-GQ 957
            ..:||..|.|......:...|:|..||.|:|||     :|.:...:..||||..|.:|:.:. |.
plant   538 YYVNLSNNTLIGFQRPSKPEPSLLYLLGSNNNF-----IGKIPSFICGLRSLNTLDLSDNNFNGS 597

  Fly   958 IPDLLFAKNTNLVRLDLCDNRLT-QINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLD 1021
            ||..:....:.|..|:|..|.|: .:.:.||   .:.:.|.:..|:|......:|...||||.|:
plant   598 IPRCMGHLKSTLSVLNLRQNHLSGGLPKQIF---EILRSLDVGHNQLVGKLPRSLSFFSTLEVLN 659

  Fly  1022 LARNQLASIDFFKLSGTLNLRQLILRDNKITALSG-FNAVNLTQLDSVDLSGNLLL-SLPANFLR 1084
            :..|::.....|.||....|:.|:||.|   |..| .:.....:|..:|:|.|... :||..:. 
plant   660 VESNRINDTFPFWLSSLPKLQVLVLRSN---AFHGPIHEATFPELRIIDISHNRFNGTLPTEYF- 720

  Fly  1085 HSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYP----YLKELYIC 1145
                             :..||:|.               :.:......|:|.    |.::..:.
plant   721 -----------------VKWSAMSS---------------LGKNEDQSNEKYMGSGLYYQDSMVL 753

  Fly  1146 QTN---------LSILTSKDFEA-------------FQALQHLHLVNNRITRISPGAFKSLTNLL 1188
            ...         |:|.|:.||..             .:.|..|.|.||..:...|.:..:||.|.
plant   754 MNKGVAMELVRILTIYTAVDFSGNRFEGEIPKSIGLLKELLVLSLSNNAFSGHMPSSMGNLTALE 818

  Fly  1189 TLDLSVNELE-MLPKERLQGLRLLRFLNISHNTLKDL 1224
            :||:|.|:|. .:|:| |..|..|.::|.|||.|..|
plant   819 SLDVSKNKLTGEIPQE-LGDLSFLAYMNFSHNQLAGL 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380 17/70 (24%)
LRR_8 373..433 CDD:290566 10/30 (33%)
LRR_RI 397..648 CDD:238064 71/260 (27%)
leucine-rich repeat 399..422 CDD:275380 4/19 (21%)
leucine-rich repeat 462..485 CDD:275380 9/22 (41%)
LRR_8 465..520 CDD:290566 19/54 (35%)
leucine-rich repeat 486..509 CDD:275380 7/22 (32%)
LRR_8 508..567 CDD:290566 18/59 (31%)
leucine-rich repeat 510..533 CDD:275380 7/22 (32%)
LRR_RI 527..785 CDD:238064 56/260 (22%)
leucine-rich repeat 534..556 CDD:275380 8/22 (36%)
LRR_8 555..613 CDD:290566 11/57 (19%)
leucine-rich repeat 557..580 CDD:275380 3/22 (14%)
leucine-rich repeat 581..604 CDD:275380 4/22 (18%)
LRR_8 604..663 CDD:290566 18/60 (30%)
leucine-rich repeat 605..628 CDD:275380 6/23 (26%)
leucine-rich repeat 629..652 CDD:275380 7/23 (30%)
LRR_8 652..711 CDD:290566 13/58 (22%)
leucine-rich repeat 653..676 CDD:275380 5/22 (23%)
leucine-rich repeat 677..700 CDD:275380 3/22 (14%)
leucine-rich repeat 701..748 CDD:275380 11/46 (24%)
leucine-rich repeat 725..736 CDD:275378 3/10 (30%)
leucine-rich repeat 749..772 CDD:275380 4/22 (18%)
LRR_8 771..831 CDD:290566 10/59 (17%)
leucine-rich repeat 773..793 CDD:275380 1/19 (5%)
LRR_RI 804..1076 CDD:238064 70/287 (24%)
LRR_8 821..903 CDD:290566 19/94 (20%)
leucine-rich repeat 821..844 CDD:275380 3/22 (14%)
leucine-rich repeat 845..868 CDD:275380 5/27 (19%)
leucine-rich repeat 869..892 CDD:275380 4/22 (18%)
leucine-rich repeat 893..915 CDD:275380 5/21 (24%)
leucine-rich repeat 916..944 CDD:275380 9/27 (33%)
leucine-rich repeat 945..968 CDD:275380 6/23 (26%)
LRR_8 967..1027 CDD:290566 17/60 (28%)
leucine-rich repeat 969..992 CDD:275380 7/23 (30%)
leucine-rich repeat 993..1014 CDD:275380 4/20 (20%)
LRR_8 1015..1075 CDD:290566 20/60 (33%)
leucine-rich repeat 1017..1040 CDD:275380 7/22 (32%)
leucine-rich repeat 1041..1064 CDD:275380 7/23 (30%)
LRR_RI <1047..1244 CDD:238064 46/207 (22%)
LRR_8 1063..1125 CDD:290566 9/62 (15%)
leucine-rich repeat 1089..1114 CDD:275380 3/24 (13%)
leucine-rich repeat 1115..1162 CDD:275380 8/72 (11%)
LRR_8 1163..1219 CDD:290566 21/56 (38%)
leucine-rich repeat 1163..1186 CDD:275380 7/22 (32%)
leucine-rich repeat 1187..1210 CDD:275380 10/23 (43%)
leucine-rich repeat 1211..1233 CDD:275380 7/14 (50%)
leucine-rich repeat 1234..1257 CDD:275380
LRR_8 1235..1292 CDD:290566
leucine-rich repeat 1258..1279 CDD:275380
leucine-rich repeat 1282..1306 CDD:275380
RLP53NP_001332753.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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