DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and RLP40

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_566757.2 Gene:RLP40 / 822091 AraportID:AT3G24982 Length:915 Species:Arabidopsis thaliana


Alignment Length:1038 Identity:223/1038 - (21%)
Similarity:360/1038 - (34%) Gaps:358/1038 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 FDNTACPCYKFEDGLFLE--CPGTTAISLRSTLERISAPIHSLSIYDFDRSVTSLSQDVFQPGVH 301
            ||..||......:|::.:  ....|.:.||:.|.....|  :.|::.|.               |
plant    83 FDTRACNHSDPWNGVWCDDSTGAVTMLQLRACLSGTLKP--NSSLFQFH---------------H 130

  Fly   302 IRHLQFSHSHLEALKDNSLRNVRSSLESLSI-VNGKLTQMPSRALSSMQKLTALDFDYNEIVRVD 365
            :|.|...|::..:...:|...:.::||.||: .:|.|.|:|. :.|::..|:||....|::    
plant   131 LRSLLLPHNNFTSSSISSKFGMLNNLEVLSLSSSGFLAQVPF-SFSNLSMLSALVLSNNDL---- 190

  Fly   366 DYSFYGLRISKLNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRLSN 430
                                                         |..|...|.|..||:|.:|.
plant   191 ---------------------------------------------TGSLSFARNLRKLRVLDVSY 210

  Fly   431 NRIPTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQ 495
            |.   |.|   :...|:|       .|:|..:|:|:|..|.|....                   
plant   211 NH---FSG---ILNPNSS-------LFELHHIIYLNLRYNNFTSSS------------------- 243

  Fly   496 IELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIGGVFSNLPQLREV 560
                .|..|.:|.:|..||:|.|...|..|.                       ..|||.||.|:
plant   244 ----LPYEFGNLNKLEVLDVSSNSFFGQVPP-----------------------TISNLTQLTEL 281

  Fly   561 FLSENNIL-ELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFI-PLLPVTLF 623
            :|..|:.. .||  ...|.|.:.:::|..|..:...|:...|:..|.:|.|:.|.: ..:.|...
plant   282 YLPLNHFTGSLP--LVQNLTKLSILHLFGNHFSGTIPSSLFTMPFLSYLSLKGNNLNGSIEVPNS 344

  Fly   624 DKSTKLTSLSLDNNEIQ-------------------------DLEIGMFRKLEHLREVRLHNNRI 663
            ..|::|.||.|..|..:                         .:::.:|..|:.|..:.|..:.|
plant   345 SSSSRLESLHLGENHFEGKILEPISKLINLKELDLSFLNTSYPIDLSLFSSLKSLLLLDLSGDWI 409

  Fly   664 RRVRRGVFEPLPS-LQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLS 727
            .:....:...:|| |:.|.::...|.|. |..|.||.|:::|.|.:|:::   ..||:       
plant   410 SKASLTLDSYIPSTLEVLRLEHCDISDF-PNVFKTLHNLEYIALSNNRIS---GKFPE------- 463

  Fly   728 VQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIE--KDT 790
                                     ||             ...|:|..::::||.:...|  .:.
plant   464 -------------------------WL-------------WSLPRLSSVFITDNLLTGFEGSSEV 490

  Fly   791 FVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPL 855
            .|| ..:|.|.|..|.|...          |..|.|:.|:..||:                    
plant   491 LVN-SSVQILSLDTNSLEGA----------LPHLPLSINYFSAID-------------------- 524

  Fly   856 VQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDIPNLRRLL 920
                 :.|..:.||:..|                          |:.|:..|             
plant   525 -----NRFGGDIPLSICN--------------------------RSSLDVLD------------- 545

  Fly   921 LSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRN 985
            ||:|||:     |.:...|..|..| :|..:|.. |.|||..: ::|.|..||:..||||     
plant   546 LSYNNFT-----GPIPPCLSNLLYL-KLRKNNLE-GSIPDKYY-EDTPLRSLDVGYNRLT----- 597

  Fly   986 IFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNK 1050
                              ...|. :|.|.|.|:.|.:..|.:.....|.|.....|:.|:|..||
plant   598 ------------------GKLPR-SLINCSALQFLSVDHNGIKDTFPFSLKALPKLQVLLLSSNK 643

  Fly  1051 ITA-LSGFN--AVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSSALS---D 1109
            ... ||..|  .:...:|..::::||   .|..:|           ||::.|:...:|:.:   |
plant   644 FYGPLSPPNEGPLGFPELRILEIAGN---KLTGSF-----------LSSDFFVNWKASSHTMNED 694

  Fly  1110 VSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSK---DFEA------------ 1159
            :.:..:....:.||.....|...:.||   |.|.:.|.|  :|||.   ||..            
plant   695 LGLYMVYGKVIFGNYHLTYYETIDLRY---KGLSMEQRN--VLTSSATIDFSGNRLEGEIPESIG 754

  Fly  1160 -FQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTL 1221
             .:||..|:|.||..|...|.:|.:|..:.:||||.|:|.......|:.|..|.::|:|||.|
plant   755 LLKALIALNLSNNAFTGHIPLSFANLKKMESLDLSSNQLSGTIPNGLRTLSFLAYVNVSHNQL 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380 4/21 (19%)
LRR_8 325..384 CDD:290566 13/59 (22%)
leucine-rich repeat 327..350 CDD:275380 9/23 (39%)
leucine-rich repeat 351..461 CDD:275380 19/109 (17%)
LRR_8 373..433 CDD:290566 9/59 (15%)
LRR_RI 397..648 CDD:238064 57/277 (21%)
leucine-rich repeat 399..422 CDD:275380 4/22 (18%)
leucine-rich repeat 462..485 CDD:275380 5/22 (23%)
LRR_8 465..520 CDD:290566 12/54 (22%)
leucine-rich repeat 486..509 CDD:275380 3/22 (14%)
LRR_8 508..567 CDD:290566 15/58 (26%)
leucine-rich repeat 510..533 CDD:275380 7/22 (32%)
LRR_RI 527..785 CDD:238064 54/285 (19%)
leucine-rich repeat 534..556 CDD:275380 3/21 (14%)
LRR_8 555..613 CDD:290566 16/58 (28%)
leucine-rich repeat 557..580 CDD:275380 7/23 (30%)
leucine-rich repeat 581..604 CDD:275380 4/22 (18%)
LRR_8 604..663 CDD:290566 15/84 (18%)
leucine-rich repeat 605..628 CDD:275380 6/23 (26%)
leucine-rich repeat 629..652 CDD:275380 7/47 (15%)
LRR_8 652..711 CDD:290566 17/59 (29%)
leucine-rich repeat 653..676 CDD:275380 3/22 (14%)
leucine-rich repeat 677..700 CDD:275380 8/22 (36%)
leucine-rich repeat 701..748 CDD:275380 5/46 (11%)
leucine-rich repeat 725..736 CDD:275378 0/10 (0%)
leucine-rich repeat 749..772 CDD:275380 2/22 (9%)
LRR_8 771..831 CDD:290566 16/61 (26%)
leucine-rich repeat 773..793 CDD:275380 4/21 (19%)
LRR_RI 804..1076 CDD:238064 58/274 (21%)
LRR_8 821..903 CDD:290566 11/81 (14%)
leucine-rich repeat 821..844 CDD:275380 6/22 (27%)
leucine-rich repeat 845..868 CDD:275380 1/22 (5%)
leucine-rich repeat 869..892 CDD:275380 2/22 (9%)
leucine-rich repeat 893..915 CDD:275380 3/21 (14%)
leucine-rich repeat 916..944 CDD:275380 8/27 (30%)
leucine-rich repeat 945..968 CDD:275380 7/22 (32%)
LRR_8 967..1027 CDD:290566 15/59 (25%)
leucine-rich repeat 969..992 CDD:275380 7/22 (32%)
leucine-rich repeat 993..1014 CDD:275380 2/20 (10%)
LRR_8 1015..1075 CDD:290566 17/62 (27%)
leucine-rich repeat 1017..1040 CDD:275380 5/22 (23%)
leucine-rich repeat 1041..1064 CDD:275380 8/25 (32%)
LRR_RI <1047..1244 CDD:238064 53/197 (27%)
LRR_8 1063..1125 CDD:290566 12/64 (19%)
leucine-rich repeat 1089..1114 CDD:275380 5/27 (19%)
leucine-rich repeat 1115..1162 CDD:275380 14/62 (23%)
LRR_8 1163..1219 CDD:290566 20/55 (36%)
leucine-rich repeat 1163..1186 CDD:275380 9/22 (41%)
leucine-rich repeat 1187..1210 CDD:275380 8/22 (36%)
leucine-rich repeat 1211..1233 CDD:275380 6/11 (55%)
leucine-rich repeat 1234..1257 CDD:275380
LRR_8 1235..1292 CDD:290566
leucine-rich repeat 1258..1279 CDD:275380
leucine-rich repeat 1282..1306 CDD:275380
RLP40NP_566757.2 LRR_RI 97..>263 CDD:238064 52/268 (19%)
LRR_8 130..190 CDD:290566 18/60 (30%)
leucine-rich repeat 131..155 CDD:275380 4/23 (17%)
leucine-rich repeat 156..179 CDD:275380 9/23 (39%)
leucine-rich repeat 180..202 CDD:275380 8/70 (11%)
LRR_8 201..264 CDD:290566 24/98 (24%)
leucine-rich repeat 203..228 CDD:275380 11/37 (30%)
leucine-rich repeat 229..253 CDD:275380 8/46 (17%)
leucine-rich repeat 254..277 CDD:275380 10/45 (22%)
leucine-rich repeat 278..300 CDD:275380 7/23 (30%)
leucine-rich repeat 301..324 CDD:275380 4/22 (18%)
leucine-rich repeat 325..349 CDD:275380 6/23 (26%)
leucine-rich repeat 350..371 CDD:275380 5/20 (25%)
LRR_8 422..481 CDD:290566 21/107 (20%)
leucine-rich repeat 424..446 CDD:275380 8/22 (36%)
leucine-rich repeat 447..468 CDD:275380 7/68 (10%)
leucine-rich repeat 471..495 CDD:275380 6/24 (25%)
leucine-rich repeat 517..540 CDD:275380 8/73 (11%)
leucine-rich repeat 541..585 CDD:275380 17/64 (27%)
LRR_8 560..620 CDD:290566 23/86 (27%)
leucine-rich repeat 563..583 CDD:275380 7/22 (32%)
leucine-rich repeat 586..609 CDD:275380 10/46 (22%)
leucine-rich repeat 610..633 CDD:275380 5/22 (23%)
leucine-rich repeat 634..660 CDD:275380 8/25 (32%)
leucine-rich repeat 735..758 CDD:275380 2/22 (9%)
leucine-rich repeat 759..782 CDD:275380 9/22 (41%)
LRR_8 762..817 CDD:290566 21/54 (39%)
leucine-rich repeat 783..806 CDD:275380 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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