DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and AT2G24130

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_001324448.1 Gene:AT2G24130 / 816947 AraportID:AT2G24130 Length:995 Species:Arabidopsis thaliana


Alignment Length:1154 Identity:257/1154 - (22%)
Similarity:408/1154 - (35%) Gaps:377/1154 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 ALKDNSLRNVRSSLESLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGLRISKLN 378
            |.|:|....::|...||......:...|..:|||.  :::.....:.:|.|.::|  |::.:|  
plant    20 ASKENDHELIKSDQISLLSFKSSIVSDPQNSLSSW--ISSSSSSSSMLVDVCNWS--GVKCNK-- 78

  Fly   379 MKGNRLQGMPEHAFAGLEECMQ--EIDVSENGLRTFPLMALRKLDHLRILRLSNNRIPTFYGDIQ 441
                              |..|  |:|:|...|.                           |:|.
plant    79 ------------------ESTQVIELDISGRDLG---------------------------GEIS 98

  Fly   442 LATNNASAAAAAVGAFQLPSLIFLDLSSNQF-AEIGPDCFRAFPQLKTLSFYANQIELVQPEAFK 505
            .:..|            |..|..||||.|.| .:|.|:.......||.||...|.:....|:...
plant    99 PSIAN------------LTGLTVLDLSRNFFVGKIPPEIGSLHETLKQLSLSENLLHGNIPQELG 151

  Fly   506 SLRELMSLDMSHNRIIGLDP-KVF--EKNKRLQTVDLSHN----------HIHTIGGVFSNLPQL 557
            .|..|:.||:..||:.|..| ::|  ..:..||.:|||:|          |.|        |.:|
plant   152 LLNRLVYLDLGSNRLNGSIPVQLFCNGSSSSLQYIDLSNNSLTGEIPLNYHCH--------LKEL 208

  Fly   558 REVFLSENNILELPADAFTNSTNVDVIYLESNAIA-HIDPNVFSTLVNLDHLYLRSN-FIPLLPV 620
            |.:.|..|.:......:.:||||:..:.||||.:: .:...|.|.:..|..|||..| |:.    
plant   209 RFLLLWSNKLTGTVPSSLSNSTNLKWMDLESNMLSGELPSQVISKMPQLQFLYLSYNHFVS---- 269

  Fly   621 TLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPL-------PSLQ 678
                                                  |||...      .||.       ..||
plant   270 --------------------------------------HNNNTN------LEPFFASLANSSDLQ 290

  Fly   679 ELHIQKNSI-EDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLS---VQLEANYLHKVH 739
            ||.:..||: .:|.....|...|:..|:|..|:   :....|.|.|:||:   :.|.:|.|....
plant   291 ELELAGNSLGGEITSSVRHLSVNLVQIHLDQNR---IHGSIPPEISNLLNLTLLNLSSNLLSGPI 352

  Fly   740 PRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSG 804
            ||...:..|::.::|.:|.||........|.|:||.|.:|.|.:.....|:|.|           
plant   353 PRELCKLSKLERVYLSNNHLTGEIPMELGDIPRLGLLDVSRNNLSGSIPDSFGN----------- 406

  Fly   805 NQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLV-QLTRDIFSNEFP 868
              |.||||           |.|..||:......:..|..||:.||||||.|. .:..::.||   
plant   407 --LSQLRR-----------LLLYGNHLSGTVPQSLGKCINLEILDLSHNNLTGTIPVEVVSN--- 455

  Fly   869 LNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLN---PADIQTLDI----------------P 914
                      ||.|:.:          |||..|.|:   |.::..:|:                |
plant   456 ----------LRNLKLY----------LNLSSNHLSGPIPLELSKMDMVLSVDLSSNELSGKIPP 500

  Fly   915 NLRR-LLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMS-NCSLGQIPDLLFAKNTNLVRLDLCDN 977
            .|.. :.|.|.|.|..|....:...|.:|..|::|.:| |...|.||. .|.:::.|..|:...|
plant   501 QLGSCIALEHLNLSRNGFSSTLPSSLGQLPYLKELDVSFNRLTGAIPP-SFQQSSTLKHLNFSFN 564

  Fly   978 RLT--QINRNIFSGLNV------------FKELRLCRNELSDFPHIALYNLSTLESLDLARNQLA 1028
            .|:  ..::..||.|.:            .|.::.|:.: ..:|.:.|..|.:|    :|...|.
plant   565 LLSGNVSDKGSFSKLTIESFLGDSLLCGSIKGMQACKKK-HKYPSVLLPVLLSL----IATPVLC 624

  Fly  1029 SIDF-------FKLSGTLNLRQLILRDNK----------------ITALSGFNAVNLTQLDSVDL 1070
            ...:       |..:.|:..::.:..:.|                |.|..||||.:|..      
plant   625 VFGYPLVQRSRFGKNLTVYAKEEVEDEEKQNQNDPKYPRISYQQLIAATGGFNASSLIG------ 683

  Fly  1071 SGNLLLSLPANFLRHSINLQKVHLSNNRFLQI----PSSALSDVSIPRLSWLNLTGNPINRIYTV 1131
            ||..            .::.|..|.||..:.:    |.:|           |..:|:.......:
plant   684 SGRF------------GHVYKGVLRNNTKVAVKVLDPKTA-----------LEFSGSFKRECQIL 725

  Fly  1132 KEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLVNNRITR-ISPGAFKSLTNLLTLDLSVN 1195
            |..|:..|         :.|:|:.....|.||....:.|..:.| :.||.:.|      .:|.:.
plant   726 KRTRHRNL---------IRIITTCSKPGFNALVLPLMPNGSLERHLYPGEYSS------KNLDLI 775

  Fly  1196 ELEMLPKERLQGLRLLRF---LNISH------NTLKDLE------EFSVDLL-----EMQTLD-- 1238
            :|..:..:..:|:..|..   :.:.|      |.|.|.|      :|.:..|     |..:.|  
plant   776 QLVNICSDVAEGIAYLHHYSPVKVVHCDLKPSNILLDDEMTALVTDFGISRLVQGVEETVSTDDS 840

  Fly  1239 LSFNQLDRI--------------SKKTFRNLHG--------LLELFLMGNRMT-VLSNDAFRFLR 1280
            :||...|.:              .|:.  :.||        |||: :.|.|.| ||.|:.    .
plant   841 VSFGSTDGLLCGSVGYIAPEYGMGKRA--STHGDVYSFGVLLLEI-VSGRRPTDVLVNEG----S 898

  Fly  1281 KLHVLDLRKNYFELVP--LEPLRPLETNLRTLRLEENPLHCSCDAQKLW 1327
            .||  :..|:::   |  ||.:  :|..|...:.:..|..|    :|||
plant   899 SLH--EFMKSHY---PDSLEGI--IEQALSRWKPQGKPEKC----EKLW 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380 3/10 (30%)
LRR_8 325..384 CDD:290566 12/58 (21%)
leucine-rich repeat 327..350 CDD:275380 6/22 (27%)
leucine-rich repeat 351..461 CDD:275380 15/111 (14%)
LRR_8 373..433 CDD:290566 7/61 (11%)
LRR_RI 397..648 CDD:238064 63/268 (24%)
leucine-rich repeat 399..422 CDD:275380 5/24 (21%)
leucine-rich repeat 462..485 CDD:275380 9/23 (39%)
LRR_8 465..520 CDD:290566 19/55 (35%)
leucine-rich repeat 486..509 CDD:275380 7/22 (32%)
LRR_8 508..567 CDD:290566 21/71 (30%)
leucine-rich repeat 510..533 CDD:275380 8/25 (32%)
LRR_RI 527..785 CDD:238064 69/282 (24%)
leucine-rich repeat 534..556 CDD:275380 9/31 (29%)
LRR_8 555..613 CDD:290566 18/58 (31%)
leucine-rich repeat 557..580 CDD:275380 6/22 (27%)
leucine-rich repeat 581..604 CDD:275380 6/23 (26%)
LRR_8 604..663 CDD:290566 9/59 (15%)
leucine-rich repeat 605..628 CDD:275380 6/23 (26%)
leucine-rich repeat 629..652 CDD:275380 0/22 (0%)
LRR_8 652..711 CDD:290566 17/66 (26%)
leucine-rich repeat 653..676 CDD:275380 5/29 (17%)
leucine-rich repeat 677..700 CDD:275380 8/23 (35%)
leucine-rich repeat 701..748 CDD:275380 13/49 (27%)
leucine-rich repeat 725..736 CDD:275378 4/13 (31%)
leucine-rich repeat 749..772 CDD:275380 5/22 (23%)
LRR_8 771..831 CDD:290566 17/59 (29%)
leucine-rich repeat 773..793 CDD:275380 7/19 (37%)
LRR_RI 804..1076 CDD:238064 75/330 (23%)
LRR_8 821..903 CDD:290566 23/82 (28%)
leucine-rich repeat 821..844 CDD:275380 5/22 (23%)
leucine-rich repeat 845..868 CDD:275380 10/23 (43%)
leucine-rich repeat 869..892 CDD:275380 3/22 (14%)
leucine-rich repeat 893..915 CDD:275380 7/40 (18%)
leucine-rich repeat 916..944 CDD:275380 8/28 (29%)
leucine-rich repeat 945..968 CDD:275380 8/23 (35%)
LRR_8 967..1027 CDD:290566 14/73 (19%)
leucine-rich repeat 969..992 CDD:275380 7/24 (29%)
leucine-rich repeat 993..1014 CDD:275380 4/20 (20%)
LRR_8 1015..1075 CDD:290566 15/82 (18%)
leucine-rich repeat 1017..1040 CDD:275380 5/29 (17%)
leucine-rich repeat 1041..1064 CDD:275380 8/38 (21%)
LRR_RI <1047..1244 CDD:238064 46/239 (19%)
LRR_8 1063..1125 CDD:290566 10/65 (15%)
leucine-rich repeat 1089..1114 CDD:275380 6/28 (21%)
leucine-rich repeat 1115..1162 CDD:275380 8/46 (17%)
LRR_8 1163..1219 CDD:290566 11/65 (17%)
leucine-rich repeat 1163..1186 CDD:275380 6/23 (26%)
leucine-rich repeat 1187..1210 CDD:275380 3/22 (14%)
leucine-rich repeat 1211..1233 CDD:275380 8/41 (20%)
leucine-rich repeat 1234..1257 CDD:275380 5/38 (13%)
LRR_8 1235..1292 CDD:290566 19/81 (23%)
leucine-rich repeat 1258..1279 CDD:275380 9/21 (43%)
leucine-rich repeat 1282..1306 CDD:275380 7/25 (28%)
AT2G24130NP_001324448.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I1746
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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