DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and PODNL1

DIOPT Version :10

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:XP_011526610.1 Gene:PODNL1 / 79883 HGNCID:26275 Length:579 Species:Homo sapiens


Alignment Length:721 Identity:192/721 - (26%)
Similarity:291/721 - (40%) Gaps:194/721 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 LQGMPEHAFAGLEECMQEIDVSENGLRTFPLM--ALRKLDHLRILRLSNNRIPTFYG---DIQLA 443
            |.|.|  ..||||:.            .||.:  :|:.|.....||.|..|:.|...   |:::.
Human    16 LPGPP--PVAGLEDA------------AFPHLGESLQPLPRACPLRCSCPRVDTVDCDGLDLRVF 66

  Fly   444 TNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQI--ELVQPEAFKS 506
            .:|.:.||.           .|.|.:||..|:..:.......|:||:.:.|.|  |.:..|||:|
Human    67 PDNITRAAQ-----------HLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFES 120

  Fly   507 LRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIGGV-FSNLPQLREVFLSENNILE- 569
            |.:|..|.::||: :.:.|:...::  |:..||:.|.:..|..: |...|.||.|:|..|.:.. 
Human   121 LTQLQHLCVAHNK-LSVAPQFLPRS--LRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSNA 182

  Fly   570 -LPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLS 633
             ||.|||..|..:..:.|.:|.::::.|   |...:|:.|:|::|.|..:|.....:.|:|..|.
Human   183 GLPPDAFRGSEAIATLSLSNNQLSYLPP---SLPPSLERLHLQNNLISKVPRGALSRQTQLRELY 244

  Fly   634 LDNNEIQD--LEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLP-SLQELHIQKNSIEDIEPQAF 695
            |.:|::.|  |:...|.||..|..:.|.:|::..|..|    || :|..||:.:|.|..:|....
Human   245 LQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAG----LPRTLAILHLGRNRIRQVEAARL 305

  Fly   696 HTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLE-ANYLHKVHPRTFSRQQKVQIMWLKDNQL 759
            |....::::.||.|||         .:|.|.:..|. ...||.:|              |..|.|
Human   306 HGARGLRYLLLQHNQL---------GSSGLPAGALRPLRGLHTLH--------------LYGNGL 347

  Fly   760 TRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQL-RRDYFAPLQDLEE 823
            .||       .|.|.|                    .|:.|.|..|.:..| .||..| ...|.|
Human   348 DRV-------PPALPR--------------------RLRALVLPHNHVAALGARDLVA-TPGLTE 384

  Fly   824 LSLARNHIEA--IEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHA 886
            |:||.|.:.:  :...||.:|:.|:||||:.|   ||||           |.:|           
Human   385 LNLAYNRLASARVHHRAFRRLRALRSLDLAGN---QLTR-----------LPMG----------- 424

  Fly   887 FKSLTNLNELNLERNQ---LNPADIQTLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQL 948
              ..|.|..|.|:|||   |.|..:..||  .||.|.|:||... .|.:|  .|....|::||.|
Human   425 --LPTGLRTLQLQRNQLRMLEPEPLAGLD--QLRELSLAHNRLR-VGDIG--PGTWHELQALQML 482

  Fly   949 SMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYN 1013
            .:|:..|..:|                                            .|.|      
Human   483 DLSHNELSFVP--------------------------------------------PDLP------ 497

  Fly  1014 LSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKI--TALSGFNAVNLTQLDSVDLSGN--- 1073
             ..||.|.|..|::..:.......|..||.|.||.|::  |:::....:.|..|..||.:||   
Human   498 -EALEELHLEGNRIGHVGPEAFLSTPRLRALFLRANRLHMTSIAAEAFLGLPNLRVVDTAGNPEQ 561

  Fly  1074 LLLSLP 1079
            :|:.||
Human   562 VLIRLP 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 LRR <301..606 CDD:443914 63/231 (27%)
leucine-rich repeat 303..325 CDD:275380
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380 20/81 (25%)
leucine-rich repeat 399..422 CDD:275380 4/24 (17%)
leucine-rich repeat 462..485 CDD:275380 5/22 (23%)
LRR 486..>736 CDD:443914 76/258 (29%)
leucine-rich repeat 486..509 CDD:275380 11/24 (46%)
leucine-rich repeat 510..533 CDD:275380 5/22 (23%)
leucine-rich repeat 534..556 CDD:275380 6/22 (27%)
leucine-rich repeat 557..580 CDD:275380 11/24 (46%)
leucine-rich repeat 581..604 CDD:275380 4/22 (18%)
leucine-rich repeat 605..628 CDD:275380 6/22 (27%)
PPP1R42 627..860 CDD:455733 68/239 (28%)
leucine-rich repeat 629..652 CDD:275380 9/24 (38%)
leucine-rich repeat 653..676 CDD:275380 7/23 (30%)
leucine-rich repeat 677..700 CDD:275380 7/22 (32%)
leucine-rich repeat 701..748 CDD:275380 11/47 (23%)
leucine-rich repeat 725..736 CDD:275378 2/11 (18%)
leucine-rich repeat 749..772 CDD:275380 5/22 (23%)
leucine-rich repeat 773..793 CDD:275380 2/19 (11%)
leucine-rich repeat 821..844 CDD:275380 9/24 (38%)
leucine-rich repeat 845..868 CDD:275380 10/22 (45%)
LRR 869..1226 CDD:443914 53/219 (24%)
leucine-rich repeat 869..892 CDD:275380 2/22 (9%)
leucine-rich repeat 893..915 CDD:275380 10/24 (42%)
leucine-rich repeat 916..944 CDD:275380 10/27 (37%)
leucine-rich repeat 945..968 CDD:275380 6/22 (27%)
leucine-rich repeat 969..992 CDD:275380 0/22 (0%)
leucine-rich repeat 993..1014 CDD:275380 2/20 (10%)
leucine-rich repeat 1017..1040 CDD:275380 6/22 (27%)
leucine-rich repeat 1041..1064 CDD:275380 8/24 (33%)
leucine-rich repeat 1089..1114 CDD:275380
leucine-rich repeat 1115..1162 CDD:275380
PPP1R42 1155..1317 CDD:455733
leucine-rich repeat 1163..1186 CDD:275380
leucine-rich repeat 1187..1210 CDD:275380
leucine-rich repeat 1211..1233 CDD:275380
leucine-rich repeat 1234..1257 CDD:275380
leucine-rich repeat 1258..1279 CDD:275380
leucine-rich repeat 1282..1306 CDD:275380
PODNL1XP_011526610.1 LRR <75..321 CDD:443914 76/266 (29%)
leucine-rich repeat 75..97 CDD:275380 5/32 (16%)
leucine-rich repeat 98..123 CDD:275380 11/24 (46%)
leucine-rich repeat 124..168 CDD:275380 11/46 (24%)
PLN00113 157..>534 CDD:215061 137/517 (26%)
leucine-rich repeat 169..194 CDD:275380 11/24 (46%)
leucine-rich repeat 195..215 CDD:275380 4/22 (18%)
leucine-rich repeat 216..239 CDD:275380 6/22 (27%)
leucine-rich repeat 240..265 CDD:275380 9/24 (38%)
leucine-rich repeat 266..287 CDD:275380 7/24 (29%)
leucine-rich repeat 289..310 CDD:275380 6/20 (30%)
leucine-rich repeat 311..336 CDD:275380 8/33 (24%)
leucine-rich repeat 337..358 CDD:275380 11/61 (18%)
leucine-rich repeat 361..428 CDD:275380 28/94 (30%)
leucine-rich repeat 429..452 CDD:275380 10/24 (42%)
leucine-rich repeat 453..478 CDD:275380 10/27 (37%)
leucine-rich repeat 500..523 CDD:275380 6/22 (27%)
leucine-rich repeat 524..547 CDD:275380 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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