DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and Igfals

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_445781.3 Gene:Igfals / 79438 RGDID:68429 Length:603 Species:Rattus norvegicus


Alignment Length:584 Identity:164/584 - (28%)
Similarity:253/584 - (43%) Gaps:96/584 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 REVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTL 622
            |.::|..||:..:|:.||.|.:::|.:.|:.:.:..::|.....|.||.||:|..|.:..|.|.|
  Rat    77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGL 141

  Fly   623 FDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSI 687
            |..:..|.||||.:|.:..||.|:|:.|.||.::.|..|.:..:...||:.|.:|.||.:..|.:
  Rat   142 FTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKL 206

  Fly   688 EDIEPQAFHTLENMQHINLQDNQL-TVLEDIFPDENSSLLSVQLEANYLHKVH-PRTFSRQQKVQ 750
            ..::|..|..|..::.::|..|.| :|..::|                   || ||       :|
  Rat   207 TYLQPALFCGLGELRELDLSRNALRSVKANVF-------------------VHLPR-------LQ 245

  Fly   751 IMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYF 815
            .::|..|.:|.|....|.....|..|.||.|::..:.:|||..||.|..|.|:.|.:..||...|
  Rat   246 KLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTF 310

  Fly   816 APLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNL-GNCSL 879
            ..|..||||.|..|.|..:....|..|..|:.|.|:.|.:.::....||..|.:..:|| ||| |
  Rat   311 KDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNC-L 374

  Fly   880 RKLEQHAFKSLTNLNELNLERNQLNPADIQTL-DIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLR 943
            |.|.:..|:.|..|:.|:||.:.|....:.|. .:..||||.|..|:.|                
  Rat   375 RSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSIS---------------- 423

  Fly   944 SLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPH 1008
            |:::.|::..|             .|:.|||..||||.:.|.:|.||...:.|.|..|:|:....
  Rat   424 SIEEQSLAGLS-------------ELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSA 475

  Fly  1009 IALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGN 1073
            ..|..|.....||::.|.|.::.....|....||.|.||:|.:...|                  
  Rat   476 EVLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFS------------------ 522

  Fly  1074 LLLSLPANFLRHSINLQKVHLSNNRF-LQIPSSALSDVS------IPRLSWLNLTGNPINRIYT 1130
                       ....|:::.|..|.: ...|..||.|.:      :||.......|:....:||
  Rat   523 -----------PQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFVQTVCEGDDCQPVYT 575

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380
LRR_8 373..433 CDD:290566
LRR_RI 397..648 CDD:238064 31/89 (35%)
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 462..485 CDD:275380
LRR_8 465..520 CDD:290566
leucine-rich repeat 486..509 CDD:275380
LRR_8 508..567 CDD:290566 3/8 (38%)
leucine-rich repeat 510..533 CDD:275380
LRR_RI 527..785 CDD:238064 67/228 (29%)
leucine-rich repeat 534..556 CDD:275380
LRR_8 555..613 CDD:290566 17/54 (31%)
leucine-rich repeat 557..580 CDD:275380 8/21 (38%)
leucine-rich repeat 581..604 CDD:275380 4/22 (18%)
LRR_8 604..663 CDD:290566 25/58 (43%)
leucine-rich repeat 605..628 CDD:275380 9/22 (41%)
leucine-rich repeat 629..652 CDD:275380 11/22 (50%)
LRR_8 652..711 CDD:290566 16/58 (28%)
leucine-rich repeat 653..676 CDD:275380 6/22 (27%)
leucine-rich repeat 677..700 CDD:275380 7/22 (32%)
leucine-rich repeat 701..748 CDD:275380 9/48 (19%)
leucine-rich repeat 725..736 CDD:275378 0/10 (0%)
leucine-rich repeat 749..772 CDD:275380 6/22 (27%)
LRR_8 771..831 CDD:290566 24/59 (41%)
leucine-rich repeat 773..793 CDD:275380 8/19 (42%)
LRR_RI 804..1076 CDD:238064 77/273 (28%)
LRR_8 821..903 CDD:290566 30/82 (37%)
leucine-rich repeat 821..844 CDD:275380 9/22 (41%)
leucine-rich repeat 845..868 CDD:275380 6/22 (27%)
leucine-rich repeat 869..892 CDD:275380 10/23 (43%)
leucine-rich repeat 893..915 CDD:275380 6/22 (27%)
leucine-rich repeat 916..944 CDD:275380 7/27 (26%)
leucine-rich repeat 945..968 CDD:275380 2/22 (9%)
LRR_8 967..1027 CDD:290566 21/59 (36%)
leucine-rich repeat 969..992 CDD:275380 12/22 (55%)
leucine-rich repeat 993..1014 CDD:275380 5/20 (25%)
LRR_8 1015..1075 CDD:290566 12/59 (20%)
leucine-rich repeat 1017..1040 CDD:275380 5/22 (23%)
leucine-rich repeat 1041..1064 CDD:275380 7/22 (32%)
LRR_RI <1047..1244 CDD:238064 15/91 (16%)
LRR_8 1063..1125 CDD:290566 10/68 (15%)
leucine-rich repeat 1089..1114 CDD:275380 7/31 (23%)
leucine-rich repeat 1115..1162 CDD:275380 3/16 (19%)
LRR_8 1163..1219 CDD:290566
leucine-rich repeat 1163..1186 CDD:275380
leucine-rich repeat 1187..1210 CDD:275380
leucine-rich repeat 1211..1233 CDD:275380
leucine-rich repeat 1234..1257 CDD:275380
LRR_8 1235..1292 CDD:290566
leucine-rich repeat 1258..1279 CDD:275380
leucine-rich repeat 1282..1306 CDD:275380