DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and kek6

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster


Alignment Length:581 Identity:118/581 - (20%)
Similarity:201/581 - (34%) Gaps:192/581 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1105 SALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYL-KELYICQTNLSILTSKDFEAFQALQHLHL 1168
            |:|...:||......|      ::..:.:...||| :|.:   :.|.:|.         ||.::|
  Fly    56 SSLQLTTIPNTLSTEL------QVLVLNDNHIPYLNREEF---STLGLLN---------LQRIYL 102

  Fly  1169 VNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFSVDLL- 1232
            ..:.:..|...:|::|..|:.:|||.|:||||.|:...|...||.|.::.|.||.|..:...:| 
  Fly   103 KKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLRILYLNGNPLKRLAAYQFPILP 167

  Fly  1233 EMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYFELVPL 1297
            .::|||:....:..|...:..||:.|..|.|..|.:..||...|:.:                  
  Fly   168 HLRTLDMHDCLISYIDPMSLANLNLLEFLNLKNNLLESLSEYVFQHM------------------ 214

  Fly  1298 EPLRPLETNLRTLRLEENPLHCSCDAQKLWEWLRDHRKWSLSMGSGAGRGIGGLTGGLGGDSINY 1362
                   .||:||.|||||..|:|..:|...|..:.|..|:|                       
  Fly   215 -------ANLKTLSLEENPWQCNCKLRKFRGWYVNSRLSSVS----------------------- 249

  Fly  1363 LRCEHPTELRGKVFGRMEPQQFCDAPLIPKMAIQDIQPYSVVVSWQSRDHLGLNGFEIVYHATGD 1427
            |.|:.|...:.:.:..::.:.|...|.:.....:::|...:          |.|        |..
  Fly   250 LVCKGPPAQKDRTWDSVDDELFGCPPRVEIFNNEEVQNIDI----------GSN--------TTF 296

  Fly  1428 GLVTAGSPTSRERDSLRDIHDPERQRTRDQARERSRERDRDRERDRERFSIATDEIHGKRLNG-- 1490
            ..:..|.|.            ||                            ...|::||.|:.  
  Fly   297 SCLVYGDPL------------PE----------------------------VAWELNGKILDNDN 321

  Fly  1491 ---TASSTKLTKLSPN-TRYHICVIGSGNWLSEPLANALQRLHTNESLREEEAVM-MSAPLPESF 1550
               .:.|....||..| |.:::..:.:|.:.... :|::..:..|.|:...|.|. :....||:|
  Fly   322 VLFESESIASDKLWSNLTVFNVTSLDAGTYACTG-SNSIGSMTQNISIYLSEIVQHVLEKTPETF 385

  Fly  1551 ----------------------------SPYQHQHNRNSNGNANPAMVQDHNKKQNPDQDLDNVV 1587
                                        :..||:| .|..|..:.....|..||           
  Fly   386 WYFGLIMGIFGTVFLLISISFVVCLCKRTTRQHRH-ANKAGVKSSVSFNDQEKK----------- 438

  Fly  1588 GQDNALMEVLKNSHISACT----DVQTLDSTPSLVTDENGLSSN-GF----IHSILTRRLG 1639
                     |.:|.::..|    |...:|:.|:.:....|.|:. ||    ||::.:.|.|
  Fly   439 ---------LLDSSVTTTTNDRGDSYGIDNQPTSIGMNKGDSAGMGFNQIEIHAVESHRHG 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380
LRR_8 373..433 CDD:290566
LRR_RI 397..648 CDD:238064
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 462..485 CDD:275380
LRR_8 465..520 CDD:290566
leucine-rich repeat 486..509 CDD:275380
LRR_8 508..567 CDD:290566
leucine-rich repeat 510..533 CDD:275380
LRR_RI 527..785 CDD:238064
leucine-rich repeat 534..556 CDD:275380
LRR_8 555..613 CDD:290566
leucine-rich repeat 557..580 CDD:275380
leucine-rich repeat 581..604 CDD:275380
LRR_8 604..663 CDD:290566
leucine-rich repeat 605..628 CDD:275380
leucine-rich repeat 629..652 CDD:275380
LRR_8 652..711 CDD:290566
leucine-rich repeat 653..676 CDD:275380
leucine-rich repeat 677..700 CDD:275380
leucine-rich repeat 701..748 CDD:275380
leucine-rich repeat 725..736 CDD:275378
leucine-rich repeat 749..772 CDD:275380
LRR_8 771..831 CDD:290566
leucine-rich repeat 773..793 CDD:275380
LRR_RI 804..1076 CDD:238064
LRR_8 821..903 CDD:290566
leucine-rich repeat 821..844 CDD:275380
leucine-rich repeat 845..868 CDD:275380
leucine-rich repeat 869..892 CDD:275380
leucine-rich repeat 893..915 CDD:275380
leucine-rich repeat 916..944 CDD:275380
leucine-rich repeat 945..968 CDD:275380
LRR_8 967..1027 CDD:290566
leucine-rich repeat 969..992 CDD:275380
leucine-rich repeat 993..1014 CDD:275380
LRR_8 1015..1075 CDD:290566
leucine-rich repeat 1017..1040 CDD:275380
leucine-rich repeat 1041..1064 CDD:275380
LRR_RI <1047..1244 CDD:238064 39/140 (28%)
LRR_8 1063..1125 CDD:290566 5/19 (26%)
leucine-rich repeat 1089..1114 CDD:275380 3/8 (38%)
leucine-rich repeat 1115..1162 CDD:275380 7/47 (15%)
LRR_8 1163..1219 CDD:290566 20/55 (36%)
leucine-rich repeat 1163..1186 CDD:275380 6/22 (27%)
leucine-rich repeat 1187..1210 CDD:275380 11/22 (50%)
leucine-rich repeat 1211..1233 CDD:275380 8/22 (36%)
leucine-rich repeat 1234..1257 CDD:275380 6/22 (27%)
LRR_8 1235..1292 CDD:290566 13/56 (23%)
leucine-rich repeat 1258..1279 CDD:275380 7/20 (35%)
leucine-rich repeat 1282..1306 CDD:275380 0/23 (0%)
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380 6/33 (18%)
LRR_8 96..155 CDD:290566 21/67 (31%)
leucine-rich repeat 97..120 CDD:275380 6/22 (27%)
leucine-rich repeat 121..144 CDD:275380 11/22 (50%)
LRR_4 144..186 CDD:289563 12/41 (29%)
leucine-rich repeat 145..168 CDD:275380 8/22 (36%)
leucine-rich repeat 169..216 CDD:275380 13/71 (18%)
LRRCT 225..274 CDD:214507 13/71 (18%)
Ig 295..367 CDD:143165 16/112 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453693
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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