DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42346 and CG7896

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster


Alignment Length:1629 Identity:383/1629 - (23%)
Similarity:617/1629 - (37%) Gaps:480/1629 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 IVNGKLTQMP--------SRALSSMQKLTALDFDYNEIVRVDDYSFYGLRISKLNMKGNRLQGMP 388
            :.:|...|:|        ::..|..|.|.|..|...:           |.|.:|::..|.::.:|
  Fly    69 VFHGDAPQLPYGAPIVAYTQRHSGQQVLPAQTFGQLK-----------LTIEELDLSYNLIRRIP 122

  Fly   389 EHAFAGLEECMQEIDVSENGL-----RTFPLMALRKLDHLRILRLSNNRI--------------P 434
            |.||.||::.:.|:.::.|.|     ..|....|..|.:||:|.||.|:|              .
  Fly   123 EKAFDGLKDSLNELRLANNLLGDNLNPIFSTAELHVLKNLRLLDLSGNKIKLIEEGLLKGCMDLK 187

  Fly   435 TFYGD----IQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQ 495
            .||.|    ..:.||:.:..:|         |..|.|..||...:..|.|.|..||:.:....|.
  Fly   188 EFYIDRNSLTSVPTNSLNGPSA---------LRHLSLRQNQIGSLLADSFNAQRQLEIIDLRHNV 243

  Fly   496 IELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHN-----------------H 543
            |..:...|||.|:::..:.::.|||..|:..||||.:.||.:|||.|                 |
  Fly   244 IRSIDSLAFKGLQKIREIKLAGNRISHLNSDVFEKLQSLQKLDLSENFFGQFPTVALAAVPGLKH 308

  Fly   544 IHTIGGVFSNLP--------QLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFS 600
            ::....:...|.        .|..:.:|.|.|..:....|.....:..:.|..|::..|:.:...
  Fly   309 LNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFREMGALKYLDLSLNSLRTIEDDALE 373

  Fly   601 TLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLE--HLREVRLHNNRI 663
            .|.:|..|.::.|.|.|:|.:...:..:||||.||.|.:..|...:...|:  .:..:.|..|.|
  Fly   374 GLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDYNRVAALSAEILGSLQAGDITTLSLSRNVI 438

  Fly   664 RRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLEN-MQHINLQDNQLTVLED---IFPDENSS 724
            |.:..|.|:...||..|.:..||:..|....|..||: :..:.|..|:||.|..   :.|:    
  Fly   439 RELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNRLTGLGGAPWVLPE---- 499

  Fly   725 LLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKD 789
            |.|:.|..|.|.::....|...:.||.:.|..|.|          ||..|.|:      :.::: 
  Fly   500 LRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHL----------TPLTGALF------KPLDR- 547

  Fly   790 TFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNP 854
                   ||.:||||..:||:..|..|.||||:.:.|..|.::.::..:|..|.|:.|:|||:|.
  Fly   548 -------LQVIDLSGCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNR 605

  Fly   855 LVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLN---PADIQTLDIPNL 916
            :..:....|.|...|..|:|....|...:...|.:.|.:.||::..|||:   |:..:.  .|.|
  Fly   606 IGSIRSGAFVNVMKLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRI--HPRL 668

  Fly   917 RRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQ 981
            |.:..::|.||:     ..|.::..|:.|:.:.:|:..|..|.:|.||:   |.||         
  Fly   669 REIRAANNKFSF-----FPAELISTLQYLEHIDLSHNQLKTIEELDFAR---LPRL--------- 716

  Fly   982 INRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLIL 1046
                        :.|.:..|:|.....:|.:|.:.|:.||||.|.|..|......|.:.|.||.|
  Fly   717 ------------RVLLVANNQLDMVSEMAFHNSTQLQILDLAHNNLDRIGERTFEGLVRLEQLNL 769

  Fly  1047 RDNKITALSG--FNAVNLTQLDSVDLSGNLLLSLPANFL-RHSINLQKVHLSNNRFLQIPSSALS 1108
            ..|:::.||.  |....|..|::::|:.|.....|.|.| |....:..|.||:|:..::|.....
  Fly   770 EGNRLSELSDGVFERTKLQMLENINLAHNRFEYAPLNALQRQFFFVSSVDLSHNKIKELPGDDSI 834

  Fly  1109 DVSIPRLSWLNLTGNPIN--RIYTVKEERYPYLKELYICQT---NLSILTSKDFEAFQALQHLHL 1168
            .|:|.|   ::|:.||::  .::.|..|. ..::||.:..|   ||.:|.:      ..||.|:|
  Fly   835 MVNIKR---IDLSFNPLSSKAVHNVLNEP-KTVRELSLAGTGIENLELLET------PFLQFLNL 889

  Fly  1169 VNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQ----GLRLLRFLNISHNTLKDLEEFSV 1229
            .:|::..:.|..|:.:|.|.|||||.|:||.|  |.|.    .|::|:.|::|:|:.:.:.:.:.
  Fly   890 SHNKLKNVKPEVFQRVTLLETLDLSSNQLESL--EDLSMAWPQLQVLQSLDVSNNSFEIVSQSNF 952

  Fly  1230 DLLEM-QTLDLS-FNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYF 1292
            ..||| ::|.|| ..|..||.|..|:.|..|:.|            :|:. |..|..||| :...
  Fly   953 GKLEMLRSLRLSHLPQCTRIEKNAFKQLPNLVSL------------EAYD-LPLLGYLDL-QGIL 1003

  Fly  1293 ELVP---------------LEPLRPLE-TNLRTLRLEENPLHCSCDAQKLWEWLRDHRKWSLSMG 1341
            ||:|               .|.::||: ..|::|                  .:|..|..|:|.|
  Fly  1004 ELLPGLEVLDIEVKDSSIGSEQIQPLKHPRLKSL------------------GIRGDRLKSISSG 1050

  Fly  1342 SGAGRGIGGLTGGLGGDSINYL---------RCEH-PTELRGKVFGRMEPQQFCDAPLIPKMAIQ 1396
            :.||.....|:..|...|:|.|         |..| ...:.|.....:.| ||.:| |..:.|..
  Fly  1051 TLAGLKSNDLSVQLRNTSLNALPPALLFPVPRSSHLSLNVEGSKITVLVP-QFLNA-LEDRRASL 1113

  Fly  1397 DIQPYSVVVSWQSRDHLGLNGFEIVYHATGDGL-----------VTAGSPTSRERDSLRDIHDPE 1450
            .:|              ||....||.......|           ||..||.......|.::.|.|
  Fly  1114 QLQ--------------GLASNPIVCDCNARALRRWLPSSGMPDVTCASPAYLLNRKLIEVGDDE 1164

  Fly  1451 -----RQRTRDQARERSRERDRDRERDRERFSIATDEIHGKRLNGTASSTKLTKLSPNTRYHICV 1510
                 |:.|...:|.                              |||...|.|.|         
  Fly  1165 LTCDARRMTSSTSRP------------------------------TASVPHLLKTS--------- 1190

  Fly  1511 IGSGNWLSEPLANALQRLHTNESLREEEAVMMSAPLPESFSPYQHQHNRNSNGNANPAMVQDHNK 1575
                           .:|.|..|...||.:::     .|..|.|....:.....| |.|     |
  Fly  1191 ---------------SQLVTRSSSTTEEPLII-----WSLEPTQPPSLKKMKTKA-PLM-----K 1229

  Fly  1576 KQNPDQDLDNVVGQDNALMEVLKNSHISACTDVQTLDSTPSLVTDENGLSSNGFIHSILTRRLGL 1640
            .|:|      ::..|:.                                               |
  Fly  1230 AQSP------IISNDDT-----------------------------------------------L 1241

  Fly  1641 IVGCCLGIIVFI-VMISVLSYVKLKKKRIE-----------------------NAKRQA-----A 1676
            |:|...|::.|| ::|.::..::|:....|                       |.|..|     |
  Fly  1242 IIGIVGGVVAFIAILIIIICIIRLRMSNAEYQQNATMIGIPAGMQMGAHNAAYNYKNGAGAALYA 1306

  Fly  1677 LPPEYISYRHFSIPNE--ELTRTAANAG----------TVAAAAAANNSHNSNNSTDEGSSPHMS 1729
            :||     .|.::|::  .:.:::.|..          .|||||||.::              ||
  Fly  1307 VPP-----YHATLPHKAASIHQSSQNLSQRQQQQQQQQQVAAAAAAYST--------------MS 1352

  Fly  1730 SVPSGISAHISGTSLSTGGTGTGSTTTTATTPIGGVPLGKAGSTLVGVGLVVADSSVDVGYAHNH 1794
            .:     ::.||..   ||.|.|:.:.|                                  |.|
  Fly  1353 RM-----SYFSGAG---GGNGDGAESLT----------------------------------HQH 1375

  Fly  1795 AHAH 1798
            .|.|
  Fly  1376 PHQH 1379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566 12/59 (20%)
leucine-rich repeat 327..350 CDD:275380 4/25 (16%)
leucine-rich repeat 351..461 CDD:275380 32/132 (24%)
LRR_8 373..433 CDD:290566 21/64 (33%)
LRR_RI 397..648 CDD:238064 74/298 (25%)
leucine-rich repeat 399..422 CDD:275380 6/27 (22%)
leucine-rich repeat 462..485 CDD:275380 8/22 (36%)
LRR_8 465..520 CDD:290566 16/54 (30%)
leucine-rich repeat 486..509 CDD:275380 7/22 (32%)
LRR_8 508..567 CDD:290566 19/83 (23%)
leucine-rich repeat 510..533 CDD:275380 8/22 (36%)
LRR_RI 527..785 CDD:238064 72/288 (25%)
leucine-rich repeat 534..556 CDD:275380 8/46 (17%)
LRR_8 555..613 CDD:290566 11/65 (17%)
leucine-rich repeat 557..580 CDD:275380 5/22 (23%)
leucine-rich repeat 581..604 CDD:275380 4/22 (18%)
LRR_8 604..663 CDD:290566 17/60 (28%)
leucine-rich repeat 605..628 CDD:275380 6/22 (27%)
leucine-rich repeat 629..652 CDD:275380 9/24 (38%)
LRR_8 652..711 CDD:290566 17/59 (29%)
leucine-rich repeat 653..676 CDD:275380 6/22 (27%)
leucine-rich repeat 677..700 CDD:275380 7/22 (32%)
leucine-rich repeat 701..748 CDD:275380 12/49 (24%)
leucine-rich repeat 725..736 CDD:275378 4/10 (40%)
leucine-rich repeat 749..772 CDD:275380 6/22 (27%)
LRR_8 771..831 CDD:290566 19/59 (32%)
leucine-rich repeat 773..793 CDD:275380 2/19 (11%)
LRR_RI 804..1076 CDD:238064 77/276 (28%)
LRR_8 821..903 CDD:290566 22/81 (27%)
leucine-rich repeat 821..844 CDD:275380 5/22 (23%)
leucine-rich repeat 845..868 CDD:275380 7/22 (32%)
leucine-rich repeat 869..892 CDD:275380 5/22 (23%)
leucine-rich repeat 893..915 CDD:275380 6/24 (25%)
leucine-rich repeat 916..944 CDD:275380 7/27 (26%)
leucine-rich repeat 945..968 CDD:275380 7/22 (32%)
LRR_8 967..1027 CDD:290566 14/59 (24%)
leucine-rich repeat 969..992 CDD:275380 3/22 (14%)
leucine-rich repeat 993..1014 CDD:275380 4/20 (20%)
LRR_8 1015..1075 CDD:290566 21/61 (34%)
leucine-rich repeat 1017..1040 CDD:275380 9/22 (41%)
leucine-rich repeat 1041..1064 CDD:275380 9/24 (38%)
LRR_RI <1047..1244 CDD:238064 62/210 (30%)
LRR_8 1063..1125 CDD:290566 17/62 (27%)
leucine-rich repeat 1089..1114 CDD:275380 7/24 (29%)
leucine-rich repeat 1115..1162 CDD:275380 11/51 (22%)
LRR_8 1163..1219 CDD:290566 24/59 (41%)
leucine-rich repeat 1163..1186 CDD:275380 7/22 (32%)
leucine-rich repeat 1187..1210 CDD:275380 13/26 (50%)
leucine-rich repeat 1211..1233 CDD:275380 4/21 (19%)
leucine-rich repeat 1234..1257 CDD:275380 10/24 (42%)
LRR_8 1235..1292 CDD:290566 17/57 (30%)
leucine-rich repeat 1258..1279 CDD:275380 3/20 (15%)
leucine-rich repeat 1282..1306 CDD:275380 10/39 (26%)
CG7896NP_651754.1 LRR_8 109..172 CDD:290566 20/62 (32%)
leucine-rich repeat 109..132 CDD:275380 8/22 (36%)
LRR_RI <132..338 CDD:238064 53/214 (25%)
leucine-rich repeat 133..161 CDD:275380 6/27 (22%)
LRR_8 160..220 CDD:290566 17/68 (25%)
leucine-rich repeat 162..185 CDD:275380 7/22 (32%)
leucine-rich repeat 186..209 CDD:275380 5/22 (23%)
leucine-rich repeat 210..233 CDD:275380 8/22 (36%)
LRR_8 232..290 CDD:290566 21/57 (37%)
leucine-rich repeat 234..257 CDD:275380 7/22 (32%)
leucine-rich repeat 258..281 CDD:275380 8/22 (36%)
LRR_RI 273..535 CDD:238064 68/275 (25%)
LRR_8 281..338 CDD:290566 10/56 (18%)
leucine-rich repeat 282..329 CDD:275380 8/46 (17%)
LRR_8 328..388 CDD:290566 12/59 (20%)
leucine-rich repeat 330..353 CDD:275380 5/22 (23%)
leucine-rich repeat 354..377 CDD:275380 4/22 (18%)
leucine-rich repeat 378..401 CDD:275380 6/22 (27%)
leucine-rich repeat 402..425 CDD:275380 9/22 (41%)
leucine-rich repeat 428..451 CDD:275380 6/22 (27%)
LRR_8 429..487 CDD:290566 17/57 (30%)
leucine-rich repeat 452..473 CDD:275380 6/20 (30%)
leucine-rich repeat 477..497 CDD:275378 5/19 (26%)
LRR_8 498..558 CDD:290566 22/87 (25%)
leucine-rich repeat 500..523 CDD:275380 6/22 (27%)
LRR_RI 502..769 CDD:238064 87/321 (27%)
leucine-rich repeat 524..547 CDD:275380 9/38 (24%)
leucine-rich repeat 548..571 CDD:275380 11/22 (50%)
LRR_8 572..630 CDD:290566 16/57 (28%)
leucine-rich repeat 572..595 CDD:275380 5/22 (23%)
leucine-rich repeat 596..619 CDD:275380 7/22 (32%)
LRR_8 619..678 CDD:290566 16/60 (27%)
leucine-rich repeat 620..643 CDD:275380 5/22 (23%)
leucine-rich repeat 644..667 CDD:275380 6/24 (25%)
LRR_8 666..726 CDD:290566 20/88 (23%)
leucine-rich repeat 668..691 CDD:275380 7/27 (26%)
leucine-rich repeat 692..715 CDD:275380 8/25 (32%)
LRR_8 714..774 CDD:290566 21/80 (26%)
leucine-rich repeat 716..739 CDD:275380 6/43 (14%)
leucine-rich repeat 740..761 CDD:275380 8/20 (40%)
leucine-rich repeat 764..789 CDD:275380 9/24 (38%)
leucine-rich repeat 790..810 CDD:275380 6/19 (32%)
leucine-rich repeat 818..850 CDD:275380 11/34 (32%)
leucine-rich repeat 863..883 CDD:275378 6/25 (24%)
LRR_RI <878..1070 CDD:238064 64/231 (28%)
LRR_8 884..944 CDD:290566 25/61 (41%)
LRR_4 884..925 CDD:289563 19/42 (45%)
leucine-rich repeat 884..907 CDD:275380 7/22 (32%)
leucine-rich repeat 908..933 CDD:275380 13/26 (50%)
leucine-rich repeat 934..955 CDD:275380 4/20 (20%)
leucine-rich repeat 958..982 CDD:275380 9/23 (39%)
leucine-rich repeat 983..1055 CDD:275380 22/103 (21%)
leucine-rich repeat 1009..1033 CDD:275380 3/23 (13%)
leucine-rich repeat 1058..1085 CDD:275380 6/26 (23%)
TPKR_C2 1121..1168 CDD:301599 10/46 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453697
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42484
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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