DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42346 and Tl

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster


Alignment Length:1344 Identity:271/1344 - (20%)
Similarity:447/1344 - (33%) Gaps:423/1344 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 AGIECPSFDNTACP-------CYKFEDGLFLECPGTTAISL--RSTLERISAPIHS--LSIYDFD 285
            |..|.|:|..|..|       |...:...:.:.|....|..  |..:.|...|.|:  .||.|: 
  Fly    58 ANAENPTFRLTIQPKDYVQIMCNLTDTTDYQQLPKKLRIGEVDRVQMRRCMLPGHTPIASILDY- 121

  Fly   286 RSVTSLSQDVFQP---GVHIRHLQFSHSHLEALKDNSLRNVRSSLESLSIVNGKLTQMPSRALSS 347
            ..:.|.:..:|:.   |::|     :..||:.|         ..|:.......:||.:|:..|:.
  Fly   122 LGIVSPTTLIFESDNLGMNI-----TRQHLDRL---------HGLKRFRFTTRRLTHIPANLLTD 172

  Fly   348 MQKLTALDFDYNEIVRVDDYSFYGLRISKLNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTF 412
            |:.|                       |.|.::.| ::.||.|.|..||. ::.|:...|.||..
  Fly   173 MRNL-----------------------SHLELRAN-IEEMPSHLFDDLEN-LESIEFGSNKLRQM 212

  Fly   413 PLMALRKLDHLRILRLSNNRIPTFYGDIQLATNNASAAAAAVGAF-QLPSLIFLDLSSNQFAEIG 476
            |.                                        |.| ::|.|..|:|.|||...:.
  Fly   213 PR----------------------------------------GIFGKMPKLKQLNLWSNQLHNLT 237

  Fly   477 PDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSH 541
            ...|.....:..:..:.|.||.:..:.|..|..:..:::|.|....|...:|:.||.|..|.|.:
  Fly   238 KHDFEGATSVLGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMN 302

  Fly   542 NHIHTI---GGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLV 603
            |.:...   ..:|:|.|:| ::......:..||.|.|.:||.:                      
  Fly   303 NRVPLATLPSRLFANQPEL-QILRLRAELQSLPGDLFEHSTQI---------------------- 344

  Fly   604 NLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRR 668
              .::.|..|.:..||.||.:....|.||.|.||.:..|...:|....:|.::||.:|.:..:..
  Fly   345 --TNISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTTNLTDLRLEDNLLTGISG 407

  Fly   669 GVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLEA- 732
            .:|..|.:|..|.:.:|.:..|:.:||.:...::|::|..|.:        |....||.:.|:. 
  Fly   408 DIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDI--------DLQQPLLDIMLQTQ 464

  Fly   733 -----NYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFV 792
                 .|:|.:                    ||               |.|.:|.|..:..|...
  Fly   465 INSPFGYMHGL--------------------LT---------------LNLRNNSIIFVYNDWKN 494

  Fly   793 NLLLLQFLDLSGNQLRQLRRDYFAPL-QDLEELSLARNHIEAI---------EGYAFAKLKNLKS 847
            .:|.|:.||||.|.:..|..:..|.| |:...:::..|.|..|         |||.    .||..
  Fly   495 TMLQLRELDLSYNNISSLGYEDLAFLSQNRLHVNMTHNKIRRIALPEDVHLGEGYN----NNLVH 555

  Fly   848 LDLSHNPLV---------QLTRDI----FSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLE 899
            :||:.||||         ||.|.:    :|.:|.|.:..| .||...:               ||
  Fly   556 VDLNDNPLVCDCTILWFIQLVRGVHKPQYSRQFKLRTDRL-VCSQPNV---------------LE 604

  Fly   900 RNQLNPADIQTL-------DIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQ 957
            ...:...:.|||       |.|..|:               ...|....:|:..:..:.||..| 
  Fly   605 GTPVRQIEPQTLICPLDFSDDPRERK---------------CPRGCNCHVRTYDKALVINCHSG- 653

  Fly   958 IPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDL 1022
                      ||..:.    ||..:::|:     ...||.|..|.|...|........::.||.|
  Fly   654 ----------NLTHVP----RLPNLHKNM-----QLMELHLENNTLLRLPSANTPGYESVTSLHL 699

  Fly  1023 ARNQLASIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPA---NFLR 1084
            |.|.|.|||..:|                       ..|||.|   |:|.|.|..|.|   .||.
  Fly   700 AGNNLTSIDVDQL-----------------------PTNLTHL---DISWNHLQMLNATVLGFLN 738

  Fly  1085 HSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWL-NLTGNPI--------------NRIYTVKEE 1134
            .::..:.|.||.|                  .|: :.|..|:              |.:..|..|
  Fly   739 RTMKWRSVKLSGN------------------PWMCDCTAKPLLLFTQDNFERIGDRNEMMCVNAE 785

  Fly  1135 RYPYLKELY---ICQTNLSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNE 1196
            ....:.||.   ||.....:        |.||..:..:...:...:...:......:.:.|..:.
  Fly   786 MPTRMVELSTNDICPAEKGV--------FIALAVVIALTGLLAGFTAALYYKFQTEIKIWLYAHN 842

  Fly  1197 L-------EMLPKERLQGLRLLRFLNISHNTLKDLEEFSVDLLE--MQTLDLSFNQLD-----RI 1247
            |       |.|.|::    :...|::.||.....:|::.|..||  .|...|..::.|     .|
  Fly   843 LLLWFVTEEDLDKDK----KFDAFISYSHKDQSFIEDYLVPQLEHGPQKFQLCVHERDWLVGGHI 903

  Fly  1248 SKKTFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKN--------YFELVPLEPLRPLE 1304
            .:...|::.......::.::..:.|..|....|..|...|.:.        |.::..:|.|.   
  Fly   904 PENIMRSVADSRRTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSRIIVIIYSDIGDVEKLD--- 965

  Fly  1305 TNLRTLRLEENPLHCSCDAQKLW--EWLRDHRKWSLSMGSGAGR-GIGGLTGGLGGDSINYLRCE 1366
                    ||...:...:....|  .|..|..:::|......|. |.|.|.              
  Fly   966 --------EELKAYLKMNTYLKWGDPWFWDKLRFALPHRRPVGNIGNGALI-------------- 1008

  Fly  1367 HPTELRGKVFGRME--------------PQQFCDAPLIPKMAIQDIQPYSVVVSWQSRDHLGLNG 1417
             .|.|:|....::|              |.:....||:.:  :..:.|:..::...     |.||
  Fly  1009 -KTALKGSTDDKLELIKPSPVTPPLTTPPAEATKNPLVAQ--LNGVTPHQAIMIAN-----GKNG 1065

  Fly  1418 FEIVY----------HATGDGLVTAGSPTSRERDSLRDIHDPER 1451
            ...:|          |..|..::...:..|       |:.|.|:
  Fly  1066 LTNLYTPNGKSHGNGHINGAFIINTNAKQS-------DVXDWEK 1102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380 3/21 (14%)
LRR_8 325..384 CDD:290566 10/58 (17%)
leucine-rich repeat 327..350 CDD:275380 6/22 (27%)
leucine-rich repeat 351..461 CDD:275380 17/110 (15%)
LRR_8 373..433 CDD:290566 14/59 (24%)
LRR_RI 397..648 CDD:238064 53/254 (21%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
leucine-rich repeat 462..485 CDD:275380 7/22 (32%)
LRR_8 465..520 CDD:290566 13/54 (24%)
leucine-rich repeat 486..509 CDD:275380 5/22 (23%)
LRR_8 508..567 CDD:290566 14/61 (23%)
leucine-rich repeat 510..533 CDD:275380 5/22 (23%)
LRR_RI 527..785 CDD:238064 58/266 (22%)
leucine-rich repeat 534..556 CDD:275380 6/24 (25%)
LRR_8 555..613 CDD:290566 9/57 (16%)
leucine-rich repeat 557..580 CDD:275380 6/22 (27%)
leucine-rich repeat 581..604 CDD:275380 0/22 (0%)
LRR_8 604..663 CDD:290566 18/58 (31%)
leucine-rich repeat 605..628 CDD:275380 6/22 (27%)
leucine-rich repeat 629..652 CDD:275380 8/22 (36%)
LRR_8 652..711 CDD:290566 15/58 (26%)
leucine-rich repeat 653..676 CDD:275380 6/22 (27%)
leucine-rich repeat 677..700 CDD:275380 6/22 (27%)
leucine-rich repeat 701..748 CDD:275380 9/52 (17%)
leucine-rich repeat 725..736 CDD:275378 4/16 (25%)
leucine-rich repeat 749..772 CDD:275380 2/22 (9%)
LRR_8 771..831 CDD:290566 17/60 (28%)
leucine-rich repeat 773..793 CDD:275380 5/19 (26%)
LRR_RI 804..1076 CDD:238064 69/301 (23%)
LRR_8 821..903 CDD:290566 25/103 (24%)
leucine-rich repeat 821..844 CDD:275380 6/31 (19%)
leucine-rich repeat 845..868 CDD:275380 11/35 (31%)
leucine-rich repeat 869..892 CDD:275380 4/22 (18%)
leucine-rich repeat 893..915 CDD:275380 6/28 (21%)
leucine-rich repeat 916..944 CDD:275380 2/27 (7%)
leucine-rich repeat 945..968 CDD:275380 3/22 (14%)
LRR_8 967..1027 CDD:290566 16/59 (27%)
leucine-rich repeat 969..992 CDD:275380 4/22 (18%)
leucine-rich repeat 993..1014 CDD:275380 6/20 (30%)
LRR_8 1015..1075 CDD:290566 17/59 (29%)
leucine-rich repeat 1017..1040 CDD:275380 10/22 (45%)
leucine-rich repeat 1041..1064 CDD:275380 2/22 (9%)
LRR_RI <1047..1244 CDD:238064 43/226 (19%)
LRR_8 1063..1125 CDD:290566 16/65 (25%)
leucine-rich repeat 1089..1114 CDD:275380 4/24 (17%)
leucine-rich repeat 1115..1162 CDD:275380 11/64 (17%)
LRR_8 1163..1219 CDD:290566 8/62 (13%)
leucine-rich repeat 1163..1186 CDD:275380 1/22 (5%)
leucine-rich repeat 1187..1210 CDD:275380 5/29 (17%)
leucine-rich repeat 1211..1233 CDD:275380 5/21 (24%)
leucine-rich repeat 1234..1257 CDD:275380 5/27 (19%)
LRR_8 1235..1292 CDD:290566 10/69 (14%)
leucine-rich repeat 1258..1279 CDD:275380 2/20 (10%)
leucine-rich repeat 1282..1306 CDD:275380 5/31 (16%)
TlNP_001262995.1 LRR_8 174..233 CDD:290566 23/123 (19%)
leucine-rich repeat 176..198 CDD:275380 9/45 (20%)
leucine-rich repeat 199..222 CDD:275380 7/62 (11%)
LRR_RI 216..542 CDD:238064 90/393 (23%)
LRR_8 221..281 CDD:290566 15/59 (25%)
leucine-rich repeat 223..270 CDD:275380 12/46 (26%)
leucine-rich repeat 271..294 CDD:275380 5/22 (23%)
leucine-rich repeat 295..320 CDD:275380 6/24 (25%)
leucine-rich repeat 321..343 CDD:275380 6/22 (27%)
LRR_8 342..402 CDD:290566 19/83 (23%)
leucine-rich repeat 344..367 CDD:275380 6/46 (13%)
leucine-rich repeat 368..391 CDD:275380 8/22 (36%)
LRR_8 390..450 CDD:290566 15/59 (25%)
leucine-rich repeat 392..415 CDD:275380 6/22 (27%)
leucine-rich repeat 416..439 CDD:275380 6/22 (27%)
leucine-rich repeat 440..474 CDD:275380 8/41 (20%)
leucine-rich repeat 475..498 CDD:275380 7/57 (12%)
LRR_8 477..534 CDD:290566 18/71 (25%)
leucine-rich repeat 499..520 CDD:275380 8/20 (40%)
leucine-rich repeat 523..552 CDD:275380 6/32 (19%)
LRRCT 561..619 CDD:214507 18/73 (25%)
LRRNT 631..667 CDD:214470 9/50 (18%)
leucine-rich repeat 664..693 CDD:275380 7/33 (21%)
LRR_8 669..726 CDD:290566 23/82 (28%)
leucine-rich repeat 694..715 CDD:275380 10/43 (23%)
leucine-rich repeat 716..737 CDD:275380 9/23 (39%)
LRRCT 751..800 CDD:214507 10/66 (15%)
TIR 858..996 CDD:214587 26/148 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453703
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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