DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and CG7800

DIOPT Version :10

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster


Alignment Length:718 Identity:155/718 - (21%)
Similarity:244/718 - (33%) Gaps:265/718 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   607 HLYLRSNFIPLLPVTLFD-KSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGV 670
            ||..||.       |..| |:||||...:|:.|                             :.|
  Fly    30 HLLGRSR-------TFSDKKATKLTEFHMDSCE-----------------------------KKV 58

  Fly   671 FEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLEANYL 735
            .:.:|:|:.|.::.....|.      |:.::       |||..           |.|:||....|
  Fly    59 LKLMPNLRTLELENCDSPDF------TMNDL-------NQLPY-----------LTSLQLRRGNL 99

  Fly   736 HKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFL 800
            ..:|...||:...::|:.|..|.:||:....|....||..|.|..|.|:.:..|.|.||..|..|
  Fly   100 LGLHDEHFSKWPNMKILMLGGNNITRLSNECFKGLAQLWLLSLPGNGIQGLPWDVFQNLPELLHL 164

  Fly   801 DLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSN 865
            |||||::..|..:.|..:..||.|.|..|.:..|...:...|.||:.||:|              
  Fly   165 DLSGNRIETLHENIFTGVPKLEMLLLNGNPLTWIAPTSLKSLSNLRLLDMS-------------- 215

  Fly   866 EFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDIPNLRRLLLSHNNFSYAG 930
                      ||                            ..:..|.:|....|:|.::      
  Fly   216 ----------NC----------------------------GPLPDLSLPGAHTLILDNS------ 236

  Fly   931 SVGIMAGMLDRLRSLQQLSMSNCSLGQI--PDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLNVF 993
              |:.  .||.|.|:.:|......:.:|  ||     .::::.|||..|.||             
  Fly   237 --GVQ--RLDILGSVHKLQARKNHITEIKLPD-----KSSVIELDLHSNLLT------------- 279

  Fly   994 KELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLI---------LRDN 1049
                     .:|.|.: |..:..|:.|||:.|   .|..:..:|:.|..:|.         |..|
  Fly   280 ---------ATDIPKL-LTGMWRLQRLDLSEN---IIGIYAAAGSDNTSELFILPNLMYMNLSAN 331

  Fly  1050 KITALSGFNAVNLTQLDSVDLSGNLLLSLPANF-LRHSINLQKVHLSNNRFLQIPSSALSDVSIP 1113
            ::|.|...:.:...:|..:|.|.|.:.: ||.. :..:.|||.:||.                  
  Fly   332 RLTRLHFDSPIPWERLTHLDASYNRIYA-PAKVGIDEAFNLQSLHLE------------------ 377

  Fly  1114 RLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLVNNRITRISP 1178
                    ||.||.......:.:|.|||                        :.|.:|   :..|
  Fly   378 --------GNYINNFELTPWKPHPSLKE------------------------VALYDN---KFQP 407

  Fly  1179 GAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNT-------LKDLEEF--SVDLLEM 1234
            ..:|::|.... ::.||.||.....:            |:||       :.|..:|  |:.....
  Fly   408 KGYKNITKFFN-EIGVNVLEKTQYSQ------------SNNTTPTCKPCIPDARDFPTSISADTN 459

  Fly  1235 QTLDLSFNQLDRISKKTFR-NLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYFELVPLE 1298
            ||:|...|.|   |..|:: |:..:|.|..:                   ::.|..|.|.:|.|.
  Fly   460 QTIDTKVNPL---SNDTYQWNVWNVLMLVSL-------------------IVSLFVNSFLIVKLI 502

  Fly  1299 PLR 1301
            .||
  Fly   503 RLR 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 LRR <301..606 CDD:443914
leucine-rich repeat 303..325 CDD:275380
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 462..485 CDD:275380
LRR 486..>736 CDD:443914 26/129 (20%)
leucine-rich repeat 486..509 CDD:275380
leucine-rich repeat 510..533 CDD:275380
leucine-rich repeat 534..556 CDD:275380
leucine-rich repeat 557..580 CDD:275380
leucine-rich repeat 581..604 CDD:275380
leucine-rich repeat 605..628 CDD:275380 7/21 (33%)
PPP1R42 627..860 CDD:455733 60/232 (26%)
leucine-rich repeat 629..652 CDD:275380 4/22 (18%)
leucine-rich repeat 653..676 CDD:275380 1/22 (5%)
leucine-rich repeat 677..700 CDD:275380 4/22 (18%)
leucine-rich repeat 701..748 CDD:275380 11/46 (24%)
leucine-rich repeat 725..736 CDD:275378 4/10 (40%)
leucine-rich repeat 749..772 CDD:275380 6/22 (27%)
leucine-rich repeat 773..793 CDD:275380 7/19 (37%)
leucine-rich repeat 821..844 CDD:275380 7/22 (32%)
leucine-rich repeat 845..868 CDD:275380 4/22 (18%)
LRR 869..1226 CDD:443914 69/375 (18%)
leucine-rich repeat 869..892 CDD:275380 2/22 (9%)
leucine-rich repeat 893..915 CDD:275380 1/21 (5%)
leucine-rich repeat 916..944 CDD:275380 6/27 (22%)
leucine-rich repeat 945..968 CDD:275380 4/24 (17%)
leucine-rich repeat 969..992 CDD:275380 6/22 (27%)
leucine-rich repeat 993..1014 CDD:275380 3/20 (15%)
leucine-rich repeat 1017..1040 CDD:275380 7/22 (32%)
leucine-rich repeat 1041..1064 CDD:275380 5/31 (16%)
leucine-rich repeat 1089..1114 CDD:275380 4/24 (17%)
leucine-rich repeat 1115..1162 CDD:275380 8/46 (17%)
PPP1R42 1155..1317 CDD:455733 32/157 (20%)
leucine-rich repeat 1163..1186 CDD:275380 4/22 (18%)
leucine-rich repeat 1187..1210 CDD:275380 4/22 (18%)
leucine-rich repeat 1211..1233 CDD:275380 6/30 (20%)
leucine-rich repeat 1234..1257 CDD:275380 8/23 (35%)
leucine-rich repeat 1258..1279 CDD:275380 2/20 (10%)
leucine-rich repeat 1282..1306 CDD:275380 7/20 (35%)
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 5/46 (11%)
leucine-rich repeat 65..85 CDD:275380 4/32 (13%)
LRR 68..482 CDD:443914 130/600 (22%)
leucine-rich repeat 89..112 CDD:275380 8/22 (36%)
leucine-rich repeat 113..136 CDD:275380 6/22 (27%)
leucine-rich repeat 137..160 CDD:275380 9/22 (41%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..246 CDD:275380 14/98 (14%)
leucine-rich repeat 247..267 CDD:275380 4/24 (17%)
leucine-rich repeat 268..292 CDD:275380 9/46 (20%)
leucine-rich repeat 293..322 CDD:275380 9/31 (29%)
leucine-rich repeat 395..406 CDD:275378 5/37 (14%)
Blue background indicates that the domain is not in the aligned region.

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