DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42346 and atk

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster


Alignment Length:1574 Identity:361/1574 - (22%)
Similarity:588/1574 - (37%) Gaps:401/1574 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 SHSHLEALKDNSL---RNVRSSLESLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSF 369
            |||:|..:.|...   ||::..::.|.:.|.:|..:|.|                         |
  Fly    45 SHSNLPQIMDGLKAVERNIKGRIDELVLENNQLPALPGR-------------------------F 84

  Fly   370 YG-LRISKLNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRLSN--- 430
            :| |:|.:|.::.|.::.:.......||..:.||.|.|..||:.|..:|..:.::..:.:.:   
  Fly    85 FGSLQIVRLMLRHNSIERVSNGWLNELENGLVEIFVVEPQLRSIPAESLNGMINMLAITIQSEEL 149

  Fly   431 NRIPTFYGDIQLATNNASAAAAAVGAFQ-LPSLIFLDLSSNQ---------FAEIGPDCFRAFPQ 485
            ..:|.|.|.:.|     :..:...||.| |||.:|..|...|         ...:....|.....
  Fly   150 KHLPDFSGLLSL-----TYLSVQTGALQELPSHLFRHLPKLQHIHITGGSGLTRLEAGLFDGLIS 209

  Fly   486 LKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRI--IGLDPKVFEKNKRLQTVDLSHNHIHTI- 547
            ||.|....|.:..:...|...|..|:||.:|||:|  :|:..::.:..:.|:.:.|.:|.|..| 
  Fly   210 LKNLDLSHNGLNWIHLRALSRLPNLVSLKLSHNQISDVGMVGRIVKDLEHLKKLRLDNNLITVIE 274

  Fly   548 GGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTL------VNLD 606
            .|.|.:||.|.|:.|::|.|.||...||..:..:..|||::|.|..|.|.  |.|      |...
  Fly   275 DGSFVDLPNLSELHLNDNRITELQYGAFLRTPQLKTIYLQNNLIRRIHPE--SLLQASGSGVEAV 337

  Fly   607 HLYLRSNFIPLLPV--TLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRG 669
            |:|  :|.|..:..  .|.|...:|..|.:..|.:.:|..|..|....|.::.|::|.:|.:.|.
  Fly   338 HMY--NNEIGHVEALRALLDALPRLRYLDMSGNLLSELPYGALRGHGTLEQLHLNHNHLRLIERD 400

  Fly   670 VFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLEANY 734
            ....:|:|:||.::.||:....|..|..|..::.::|..||...::........||..:.|..|.
  Fly   401 ALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFARVDSQLLAGLPSLRRLDLSENG 465

  Fly   735 LHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQF 799
            |.::.|.:|..                        .|.|..|.:|.|::..|...|.::|..|..
  Fly   466 LIELAPNSFRH------------------------NPLLETLNISSNELTKIHSSTLIHLERLFE 506

  Fly   800 LDLSGNQLRQLRRDYFAPL-QDLEELSLARNHIEAIEGYAF--AKLKNLKSLDLSHNPLVQLTRD 861
            :|.|.|||:.:    .|.| :.:|.:||..|.|.::...|.  .:|.||:.||||.|.:.||.|.
  Fly   507 VDASYNQLKSV----IAGLPRIVERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRH 567

  Fly   862 IFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDIPNLRRLLLSHNNF 926
            .|.....|..|:|....||:|:..:|..:..|..|:|:.|||..||         .|.||.    
  Fly   568 GFQGAMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEAD---------ERALLP---- 619

  Fly   927 SYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLN 991
                           |..|:.|::.:..|..|.|..|:.|:.|.:|||..|.:..|:...|....
  Fly   620 ---------------LAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQR 669

  Fly   992 VFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALSG 1056
            ..:.|.|..|.|.|. .:.|.||:.|..:||:.||::.|....:.|..|:.::.|.:|.|..|..
  Fly   670 SLEYLDLSGNALLDI-SVGLGNLNNLRDIDLSYNQISRIQSDVIGGWRNVVEIRLSNNLIVELQQ 733

  Fly  1057 FNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLT 1121
            ....||.:|..:|||.|.:.::....|:....||:..|::|:.:::                   
  Fly   734 GTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQEFVLADNKLVEL------------------- 779

  Fly  1122 GNPINRIYTVKEERYPYLKELYICQTNLSILTSKD--FEAFQALQHLHLVNNRITRISPGAFKSL 1184
                                             ||  ||...:|...|...|::..|||.:|.:.
  Fly   780 ---------------------------------KDHVFEELPSLLASHFQYNKLRYISPESFHNA 811

  Fly  1185 TNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFSV-DLLEMQTLDLSFNQLDRIS 1248
            .:|:                        |||:|:|..:::|...: .:..::.||||.|.:..:|
  Fly   812 NSLV------------------------FLNLSNNHFRNMENIGLRSMRNLEVLDLSTNGVKLVS 852

  Fly  1249 KKTFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYFELVPLEPLRPLETNLRTLRLE 1313
            ....:.|:.|:||.:..|::..:....|..:.:|.||.:|.|....:.....|.:..|:..|.::
  Fly   853 TMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMRNNQLRSIKERTFRNVRGNIAILDVD 917

  Fly  1314 ENPLHCSCDAQKLWEWLRD-------------------HRKWSLSMGS---GAGRGIGGLTGGLG 1356
            .||:.|:|:.|.|..||::                   ..:.||.:|:   |..|        ..
  Fly   918 GNPIDCNCEMQWLSVWLQETNFPYPGPKCQDGRLLRSARMERSLCVGADIYGNER--------TD 974

  Fly  1357 GDSINYLRCEHPTELRGKVFGRMEPQQF---CDAPLIPKMAIQDIQPYSVVVSWQSRDHLGLNGF 1418
            |:.:..|. ||     |.||.|..|..|   |:|                               
  Fly   975 GNQLPLLN-EH-----GDVFQRDLPDDFNDECEA------------------------------- 1002

  Fly  1419 EIVYHATGDGLVTAGS-PTSRERDSLRD--IHDPERQRTRDQARERSRERDRDRERDRERFSIAT 1480
                   |:|....|. |...|.:...|  :...|...|...|...|:     |.:.....:...
  Fly  1003 -------GEGTRLPGDRPLVGESEYFYDQYVDATEAPDTTHSAISTSQ-----RPKPTPTINSNI 1055

  Fly  1481 DEIHGKRLNGTASSTKLTKLSPNTRYHICVIGSGN---WLSEPLANA-------------LQRLH 1529
            |      ||.|...||.....|..       |||:   :...||.:.             .||..
  Fly  1056 D------LNNTILHTKYFNRKPQP-------GSGSPFTFFGYPLPSVSLGRFFGFGDRGRKQRTD 1107

  Fly  1530 TNESLREEEAVMMSAPLPESFSPYQHQ--HNRNSNGNANPAMVQ-----------DHNKKQNPDQ 1581
            :|:.:                 |..|:  |....:|.....|.|           |..|::..:.
  Fly  1108 SNDDM-----------------PATHRMAHISLPSGRGKTRMYQPNSAEFEKYLKDQQKQEKLNI 1155

  Fly  1582 DLDNVVGQD---NALMEVLKNSHISACTDVQTLDST---PSLVTDENG-------LSSNGF--IH 1631
            ..:..|..|   :::.:.|.|...||.|.|....:|   ||.:  |.|       ....||  :|
  Fly  1156 ARNRYVDTDSTTSSMEDALSNESGSAATTVGVFRTTFREPSSI--ERGGFRPIVPAHVGGFMPVH 1218

  Fly  1632 SILTRRLGLIVGCCLGIIVFIVMISVLSYV--KLKKKRIENAKRQAALPPEYISYRHFSIPNEEL 1694
            ....||         |::..:.:....|.:  .:.:::......||...|...|.........|:
  Fly  1219 DPQQRR---------GLVEVVNITGNPSEIVQGIGQRKFIPISTQARPKPTKSSGESSETATYEV 1274

  Fly  1695 TRTAANAGTVAAAAAANNSHNSNNSTDEGSSPHMSSVPSGISAHISGTSLSTGGTGTGSTTTTAT 1759
            |.|..:..|                    ::|.|..:.:      |.|..||  |.|.|||||:|
  Fly  1275 TETTPDITT--------------------TTPLMQRIAT------STTKAST--TTTRSTTTTST 1311

  Fly  1760 TPIGGVPLGKAGST 1773
            |.:.......:.||
  Fly  1312 TQVTPAENNASSST 1325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380 7/19 (37%)
LRR_8 325..384 CDD:290566 11/59 (19%)
leucine-rich repeat 327..350 CDD:275380 5/22 (23%)
leucine-rich repeat 351..461 CDD:275380 24/114 (21%)
LRR_8 373..433 CDD:290566 13/62 (21%)
LRR_RI 397..648 CDD:238064 75/274 (27%)
leucine-rich repeat 399..422 CDD:275380 8/22 (36%)
leucine-rich repeat 462..485 CDD:275380 4/31 (13%)
LRR_8 465..520 CDD:290566 15/63 (24%)
leucine-rich repeat 486..509 CDD:275380 6/22 (27%)
LRR_8 508..567 CDD:290566 21/61 (34%)
leucine-rich repeat 510..533 CDD:275380 8/24 (33%)
LRR_RI 527..785 CDD:238064 69/266 (26%)
leucine-rich repeat 534..556 CDD:275380 8/22 (36%)
LRR_8 555..613 CDD:290566 22/63 (35%)
leucine-rich repeat 557..580 CDD:275380 9/22 (41%)
leucine-rich repeat 581..604 CDD:275380 9/28 (32%)
LRR_8 604..663 CDD:290566 15/60 (25%)
leucine-rich repeat 605..628 CDD:275380 6/24 (25%)
leucine-rich repeat 629..652 CDD:275380 6/22 (27%)
LRR_8 652..711 CDD:290566 16/58 (28%)
leucine-rich repeat 653..676 CDD:275380 5/22 (23%)
leucine-rich repeat 677..700 CDD:275380 8/22 (36%)
leucine-rich repeat 701..748 CDD:275380 10/46 (22%)
leucine-rich repeat 725..736 CDD:275378 3/10 (30%)
leucine-rich repeat 749..772 CDD:275380 0/22 (0%)
LRR_8 771..831 CDD:290566 20/60 (33%)
leucine-rich repeat 773..793 CDD:275380 6/19 (32%)
LRR_RI 804..1076 CDD:238064 83/274 (30%)
LRR_8 821..903 CDD:290566 29/83 (35%)
leucine-rich repeat 821..844 CDD:275380 7/24 (29%)
leucine-rich repeat 845..868 CDD:275380 10/22 (45%)
leucine-rich repeat 869..892 CDD:275380 7/22 (32%)
leucine-rich repeat 893..915 CDD:275380 8/21 (38%)
leucine-rich repeat 916..944 CDD:275380 4/27 (15%)
leucine-rich repeat 945..968 CDD:275380 7/22 (32%)
LRR_8 967..1027 CDD:290566 19/59 (32%)
leucine-rich repeat 969..992 CDD:275380 7/22 (32%)
leucine-rich repeat 993..1014 CDD:275380 6/20 (30%)
LRR_8 1015..1075 CDD:290566 19/59 (32%)
leucine-rich repeat 1017..1040 CDD:275380 7/22 (32%)
leucine-rich repeat 1041..1064 CDD:275380 6/22 (27%)
LRR_RI <1047..1244 CDD:238064 38/199 (19%)
LRR_8 1063..1125 CDD:290566 10/61 (16%)
leucine-rich repeat 1089..1114 CDD:275380 4/24 (17%)
leucine-rich repeat 1115..1162 CDD:275380 4/48 (8%)
LRR_8 1163..1219 CDD:290566 12/55 (22%)
leucine-rich repeat 1163..1186 CDD:275380 7/22 (32%)
leucine-rich repeat 1187..1210 CDD:275380 1/22 (5%)
leucine-rich repeat 1211..1233 CDD:275380 6/22 (27%)
leucine-rich repeat 1234..1257 CDD:275380 7/22 (32%)
LRR_8 1235..1292 CDD:290566 17/56 (30%)
leucine-rich repeat 1258..1279 CDD:275380 5/20 (25%)
leucine-rich repeat 1282..1306 CDD:275380 6/23 (26%)
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380 7/44 (16%)
leucine-rich repeat 90..113 CDD:275380 4/22 (18%)
leucine-rich repeat 115..138 CDD:275380 8/22 (36%)
leucine-rich repeat 139..160 CDD:275380 3/20 (15%)
leucine-rich repeat 161..184 CDD:275380 9/27 (33%)
LRR_8 183..244 CDD:290566 14/60 (23%)
leucine-rich repeat 185..209 CDD:275380 2/23 (9%)
LRR_4 209..247 CDD:289563 13/37 (35%)
leucine-rich repeat 210..233 CDD:275380 6/22 (27%)
leucine-rich repeat 234..259 CDD:275380 8/24 (33%)
LRR_RI 250..492 CDD:238064 69/269 (26%)
LRR_8 259..318 CDD:290566 22/58 (38%)
leucine-rich repeat 260..283 CDD:275380 8/22 (36%)
leucine-rich repeat 284..307 CDD:275380 9/22 (41%)
leucine-rich repeat 308..359 CDD:275380 16/54 (30%)
leucine-rich repeat 334..348 CDD:275378 5/15 (33%)
LRR_8 358..418 CDD:290566 16/59 (27%)
leucine-rich repeat 360..383 CDD:275380 6/22 (27%)
leucine-rich repeat 384..407 CDD:275380 5/22 (23%)
LRR_8 406..466 CDD:290566 16/59 (27%)
leucine-rich repeat 408..431 CDD:275380 8/22 (36%)
leucine-rich repeat 432..455 CDD:275380 3/22 (14%)
LRR_RI 447..705 CDD:238064 87/314 (28%)
LRR_8 454..514 CDD:290566 19/83 (23%)
leucine-rich repeat 456..476 CDD:275380 6/19 (32%)
leucine-rich repeat 480..501 CDD:275380 6/20 (30%)
leucine-rich repeat 505..517 CDD:275378 5/11 (45%)
leucine-rich repeat 525..550 CDD:275380 7/24 (29%)
LRR_8 549..609 CDD:290566 22/59 (37%)
leucine-rich repeat 551..574 CDD:275380 10/22 (45%)
leucine-rich repeat 575..598 CDD:275380 7/22 (32%)
leucine-rich repeat 599..622 CDD:275380 12/50 (24%)
LRR_8 622..681 CDD:290566 17/58 (29%)
leucine-rich repeat 623..646 CDD:275380 7/22 (32%)
LRR_RI 647..896 CDD:238064 74/325 (23%)
leucine-rich repeat 647..670 CDD:275380 7/22 (32%)
leucine-rich repeat 671..693 CDD:275380 8/22 (36%)
leucine-rich repeat 694..717 CDD:275380 7/22 (32%)
LRR_8 716..776 CDD:290566 17/59 (29%)
leucine-rich repeat 718..741 CDD:275380 6/22 (27%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
LRR_8 765..824 CDD:290566 21/134 (16%)
leucine-rich repeat 766..789 CDD:275380 8/74 (11%)
leucine-rich repeat 790..813 CDD:275380 7/22 (32%)
leucine-rich repeat 814..835 CDD:275380 7/44 (16%)
leucine-rich repeat 838..861 CDD:275380 7/22 (32%)
LRR_8 862..921 CDD:290566 14/58 (24%)
leucine-rich repeat 862..885 CDD:275380 5/22 (23%)
leucine-rich repeat 886..906 CDD:275380 5/19 (26%)
TPKR_C2 919..>946 CDD:301599 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26425
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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