DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and CG32055

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster


Alignment Length:472 Identity:125/472 - (26%)
Similarity:218/472 - (46%) Gaps:29/472 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 AFQLPSLIFL------DLSSNQFAEIGPDCFRAFPQLKTLSFYANQ-------------IELVQP 501
            |.|:.:|:.|      ||...:....|....|.....:.|:.|..:             ||..:.
  Fly     3 ALQVLALLLLSGVFGKDLQECEDLGNGSYLCREIESFEQLNRYVGKNWKSVKVVNEHTGIERAED 67

  Fly   502 EAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTI-GGVFSNLPQLREVFLSEN 565
            .....|..|:.||:|.:..:.|..|..:..|.||.::|:|..:..: ...|.|..::....:|.|
  Fly    68 GELPGLSTLLQLDLSESGGVTLGEKGLQDFKALQKLNLTHAQLDELKSEQFPNPSEMINFDVSYN 132

  Fly   566 NILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLT 630
            :||.:.....:...|:.......|.||.|:||.|..:.||..|.|.:|:..  .:|| .::..|.
  Fly   133 DILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTTNYQE--NITL-GENANLR 194

  Fly   631 SLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAF 695
            .||:.||.::|.:....|.|..|.|:.||:|.:..:..|:|..||:|:.|::..|::.:|:...|
  Fly   195 FLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNLFEIKRTLF 259

  Fly   696 HTLENMQHINLQD---NQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDN 757
            .....:..:.|.|   |.:.||:|........|.::.|..|.::::|||.|.....:|.:.|:.|
  Fly   260 MAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGN 324

  Fly   758 QLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLL--LQFLDLSGNQLRQLRRDYFAPLQD 820
            :::.:....||:...|.:|.||.|.|:.:....|...:|  |.:||||.|.:..|.....:.:..
  Fly   325 KISILPDDVFANLTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNNYIADLHPLALSSMPF 389

  Fly   821 LEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKL-EQ 884
            ::||.|.||.:.:::...||.|:.|:.|.::.|.|.::..:|......||.|.|.|..|..| :.
  Fly   390 IKELRLRRNRLVSLDLRMFAPLRQLQLLTINENRLEEIDGEILDTLDRLNHLELNNNRLTFLPDL 454

  Fly   885 HAFKSLTNLNELNLERN 901
            .:.::|..|..:.||.|
  Fly   455 KSSQNLLQLRNITLEGN 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380 2/4 (50%)
LRR_8 373..433 CDD:290566
LRR_RI 397..648 CDD:238064 51/211 (24%)
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 462..485 CDD:275380 6/28 (21%)
LRR_8 465..520 CDD:290566 14/73 (19%)
leucine-rich repeat 486..509 CDD:275380 5/35 (14%)
LRR_8 508..567 CDD:290566 15/59 (25%)
leucine-rich repeat 510..533 CDD:275380 6/22 (27%)
LRR_RI 527..785 CDD:238064 72/261 (28%)
leucine-rich repeat 534..556 CDD:275380 6/22 (27%)
LRR_8 555..613 CDD:290566 16/57 (28%)
leucine-rich repeat 557..580 CDD:275380 4/22 (18%)
leucine-rich repeat 581..604 CDD:275380 7/22 (32%)
LRR_8 604..663 CDD:290566 20/58 (34%)
leucine-rich repeat 605..628 CDD:275380 6/22 (27%)
leucine-rich repeat 629..652 CDD:275380 8/22 (36%)
LRR_8 652..711 CDD:290566 17/61 (28%)
leucine-rich repeat 653..676 CDD:275380 8/22 (36%)
leucine-rich repeat 677..700 CDD:275380 5/22 (23%)
leucine-rich repeat 701..748 CDD:275380 13/49 (27%)
leucine-rich repeat 725..736 CDD:275378 3/10 (30%)
leucine-rich repeat 749..772 CDD:275380 5/22 (23%)
LRR_8 771..831 CDD:290566 20/61 (33%)
leucine-rich repeat 773..793 CDD:275380 7/19 (37%)
LRR_RI 804..1076 CDD:238064 27/99 (27%)
LRR_8 821..903 CDD:290566 25/82 (30%)
leucine-rich repeat 821..844 CDD:275380 8/22 (36%)
leucine-rich repeat 845..868 CDD:275380 5/22 (23%)
leucine-rich repeat 869..892 CDD:275380 8/23 (35%)
leucine-rich repeat 893..915 CDD:275380 4/9 (44%)
leucine-rich repeat 916..944 CDD:275380
leucine-rich repeat 945..968 CDD:275380
LRR_8 967..1027 CDD:290566
leucine-rich repeat 969..992 CDD:275380
leucine-rich repeat 993..1014 CDD:275380
LRR_8 1015..1075 CDD:290566
leucine-rich repeat 1017..1040 CDD:275380
leucine-rich repeat 1041..1064 CDD:275380
LRR_RI <1047..1244 CDD:238064
LRR_8 1063..1125 CDD:290566
leucine-rich repeat 1089..1114 CDD:275380
leucine-rich repeat 1115..1162 CDD:275380
LRR_8 1163..1219 CDD:290566
leucine-rich repeat 1163..1186 CDD:275380
leucine-rich repeat 1187..1210 CDD:275380
leucine-rich repeat 1211..1233 CDD:275380
leucine-rich repeat 1234..1257 CDD:275380
LRR_8 1235..1292 CDD:290566
leucine-rich repeat 1258..1279 CDD:275380
leucine-rich repeat 1282..1306 CDD:275380
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380 6/22 (27%)
leucine-rich repeat 100..123 CDD:275380 6/22 (27%)
LRR_8 128..180 CDD:290566 16/51 (31%)
leucine-rich repeat 128..147 CDD:275380 4/18 (22%)
leucine-rich repeat 148..171 CDD:275380 7/22 (32%)
leucine-rich repeat 172..192 CDD:275380 6/22 (27%)
LRR_RI <187..400 CDD:238064 61/213 (29%)
LRR_8 192..251 CDD:290566 20/58 (34%)
leucine-rich repeat 193..216 CDD:275380 8/22 (36%)
leucine-rich repeat 217..240 CDD:275380 8/22 (36%)
leucine-rich repeat 241..267 CDD:275380 5/25 (20%)
leucine-rich repeat 268..291 CDD:275380 6/22 (27%)
LRR_8 290..350 CDD:290566 17/59 (29%)
leucine-rich repeat 292..315 CDD:275380 7/22 (32%)
leucine-rich repeat 316..339 CDD:275380 5/22 (23%)
LRR_8 340..400 CDD:290566 20/59 (34%)
leucine-rich repeat 340..365 CDD:275380 8/24 (33%)
leucine-rich repeat 366..389 CDD:275380 7/22 (32%)
leucine-rich repeat 390..413 CDD:275380 8/22 (36%)
LRR_8 391..448 CDD:290566 18/56 (32%)
leucine-rich repeat 414..437 CDD:275380 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453521
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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