DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42346 and CG5819

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_001246458.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster


Alignment Length:1194 Identity:266/1194 - (22%)
Similarity:435/1194 - (36%) Gaps:366/1194 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 DVSENGLRTFPLMALRKLDHLRILRLSNNR---IPTFYGDIQLATNNASAAAAAVGAFQLPSLIF 464
            |.|...|:|:|......::|   |.||.|:   .||.|.||.                   |||:
  Fly    39 DCSRRSLQTYPNFDGIPVEH---LDLSGNKFLEFPTLYADID-------------------SLIY 81

  Fly   465 LDLSSNQFAEIGPDCFRAFPQLKTLSFYANQI---ELVQP-EAFKSLRELMSLDMSHNRIIGLDP 525
            ||||||..:.||......|..|:||....|.|   |.:.| ||||....|..|.:..||:     
  Fly    82 LDLSSNYISSIGAKTLIGFTSLRTLLLANNSIDSWESLSPNEAFKYAPSLKRLGLDGNRL----- 141

  Fly   526 KVFEKNKRLQTVDLSHNHIHTIGGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNA 590
                                   |.|.|                  .::|...|           
  Fly   142 -----------------------GSFGN------------------GESFELLT----------- 154

  Fly   591 IAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIG---MFRKLEH 652
                                               |:.||.|.|.:..|.  .||   |..:|.:
  Fly   155 -----------------------------------SSSLTDLGLSSCGIS--SIGGDQMVNQLPN 182

  Fly   653 LREVRLHNNRIRRVRRGVFEPLPS--LQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLE 715
            |..:.|.||::.::     ..|||  |:.|.:...||:::.......::|::.:||..|.....:
  Fly   183 LERLNLANNQLAQI-----AALPSRTLRVLDLSNCSIKNLSGFFLDAMQNLEALNLSRNTELQFD 242

  Fly   716 DIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSD 780
            .:..|...:.:..:|:.:|.:                      |..:|.|   ..|||..:.|..
  Fly   243 SLSEDPILTYMLRKLDVSYCN----------------------LDSIELS---GLPQLTEVRLQG 282

  Fly   781 NKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNL 845
            |.:|.::.:||.|..:|:.:|||.|.||.:.:|.||.|:.|:||:||.|.|..::.........|
  Fly   283 NLLRVVDVNTFANNSMLEVVDLSQNVLRHIGQDAFAKLKRLKELNLAFNEIARLDRNFIRNNDVL 347

  Fly   846 KSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQT 910
            ..|:||.|.|.:||: |.||.  :.::|:..|.:..:|..|..||:.:.:|:|..|.:.      
  Fly   348 VELNLSRNVLQKLTK-IVSNS--VRTINMSWCEITSIESTALSSLSVIQKLDLSNNLIT------ 403

  Fly   911 LDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLC 975
             |:|...                       |..:||||:::||.|..:.:..|.:...|..|.|.
  Fly   404 -DMPTFM-----------------------RSETLQQLNLANCRLTTVRNNTFREFPELADLHLN 444

  Fly   976 DNRLTQ-INRNIFSGLNVFKELRL--------CRNELSDFPHIALYNLSTLESLDLA-RNQL--- 1027
            .||||. |..|.|.|.....:|.|        |.:.|    .:..|:..|.:...:. ||.|   
  Fly   445 GNRLTSPIPPNYFDGNKFLDQLWLGDNPWICDCHSPL----FVDFYDYLTAKPAKIKDRNHLRCA 505

  Fly  1028 ASIDFFKLSGTLNLRQLILRD----NKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSIN 1088
            |...|:.     .|.:....|    |..|:.:|..|.::..|..:.| |.|:|....  |:..:.
  Fly   506 APAVFYG-----KLWEFACADVWILNARTSSTGEKAWSIIMLTLLGL-GALVLGYAC--LQKYLR 562

  Fly  1089 LQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILT 1153
            .:||..|:..:.:      :|..:.|:..||      .||  ::||..|.|:.    ...:|:|.
  Fly   563 KRKVRQSDREYEE------NDDELRRIRDLN------ERI--LREEATPSLQH----TQEISLLP 609

  Fly  1154 SKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISH 1218
            |.:    .||:...||.         ..||:     :|||       ..||.:..|.|| .:.:|
  Fly   610 SYE----DALRMPKLVR---------PVKSM-----MDLS-------GPERARNSRKLR-RSQTH 648

  Fly  1219 NTLKDLEEFSVDLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFRF----- 1278
            ......:..:.|.|          |||  |::.||::.      ::.||      |..|.     
  Fly   649 ADGDGSQSEAEDGL----------QLD--SRQRFRSVE------MLSNR------DKERTAQYGP 689

  Fly  1279 LRKLHVLDLRKNYFELVPLEPLRPLETNLRTLRLEENPLHCSCDAQKLWEWLRDHRKWSLSMGSG 1343
            .|:...::..::......:|..|....:|:|..|:..            |.:.:.:.:..|..:.
  Fly   690 YRRTGYMEYNQSGSRRFSIEDSRFPAAHLKTQNLQSA------------EQIGNFQSYENSPYTK 742

  Fly  1344 AGRGIGGLTG----GLGGDSINYLRCEHPTEL---RGKVFGRMEPQQFCDAPLIP----KMAIQD 1397
            ....|..:..    .:..||:.:|......|:   .|..|.:.:|:    .|::|    |::.| 
  Fly   743 RKPKIAEIPPFKRVNMMADSVEFLTDPEYDEVGSKHGSPFAKRKPK----PPVLPPPTMKVSAQ- 802

  Fly  1398 IQPYSVVVSWQSRDHLGLN-GFEIVYHATGDGLVTAGSPTSRE-RDSLRDIHDPERQRTRDQARE 1460
                  |.:.|....|.|: ..|..:.|      ....|:|.. ....:::.:||.:...|..|.
  Fly   803 ------VYTLQQSPVLELDPAIEDYFSA------ARKQPSSSTIASDFQELDEPELKSLPDDNRS 855

  Fly  1461 RSRERDRDRERDRERFSIATDEIHGKRLNGTASSTKLTKLSPNTRYHICVIGSGNWLSEPLANAL 1525
            .:..|. |.|:|.||         |||        |..|.|.:.|.      ||::.:   |||.
  Fly   856 STISRS-DVEQDLER---------GKR--------KKRKNSTSRRV------SGSFTA---ANAA 893

  Fly  1526 QRLHTNESLREEEAVMMSAPLPES 1549
            :...::..|.    .::..|:.|:
  Fly   894 ESSSSDSELN----ALVHKPMRET 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380 15/60 (25%)
LRR_8 373..433 CDD:290566 10/32 (31%)
LRR_RI 397..648 CDD:238064 56/254 (22%)
leucine-rich repeat 399..422 CDD:275380 5/18 (28%)
leucine-rich repeat 462..485 CDD:275380 11/22 (50%)
LRR_8 465..520 CDD:290566 23/58 (40%)
leucine-rich repeat 486..509 CDD:275380 11/26 (42%)
LRR_8 508..567 CDD:290566 7/58 (12%)
leucine-rich repeat 510..533 CDD:275380 4/22 (18%)
LRR_RI 527..785 CDD:238064 41/262 (16%)
leucine-rich repeat 534..556 CDD:275380 3/21 (14%)
LRR_8 555..613 CDD:290566 2/57 (4%)
leucine-rich repeat 557..580 CDD:275380 1/22 (5%)
leucine-rich repeat 581..604 CDD:275380 0/22 (0%)
LRR_8 604..663 CDD:290566 14/61 (23%)
leucine-rich repeat 605..628 CDD:275380 1/22 (5%)
leucine-rich repeat 629..652 CDD:275380 9/25 (36%)
LRR_8 652..711 CDD:290566 15/60 (25%)
leucine-rich repeat 653..676 CDD:275380 5/22 (23%)
leucine-rich repeat 677..700 CDD:275380 4/22 (18%)
leucine-rich repeat 701..748 CDD:275380 6/46 (13%)
leucine-rich repeat 725..736 CDD:275378 2/10 (20%)
leucine-rich repeat 749..772 CDD:275380 3/22 (14%)
LRR_8 771..831 CDD:290566 26/59 (44%)
leucine-rich repeat 773..793 CDD:275380 6/19 (32%)
LRR_RI 804..1076 CDD:238064 77/288 (27%)
LRR_8 821..903 CDD:290566 27/81 (33%)
leucine-rich repeat 821..844 CDD:275380 7/22 (32%)
leucine-rich repeat 845..868 CDD:275380 11/22 (50%)
leucine-rich repeat 869..892 CDD:275380 6/22 (27%)
leucine-rich repeat 893..915 CDD:275380 4/21 (19%)
leucine-rich repeat 916..944 CDD:275380 1/27 (4%)
leucine-rich repeat 945..968 CDD:275380 8/22 (36%)
LRR_8 967..1027 CDD:290566 19/69 (28%)
leucine-rich repeat 969..992 CDD:275380 11/23 (48%)
leucine-rich repeat 993..1014 CDD:275380 5/28 (18%)
LRR_8 1015..1075 CDD:290566 15/67 (22%)
leucine-rich repeat 1017..1040 CDD:275380 5/26 (19%)
leucine-rich repeat 1041..1064 CDD:275380 6/26 (23%)
LRR_RI <1047..1244 CDD:238064 44/200 (22%)
LRR_8 1063..1125 CDD:290566 13/61 (21%)
leucine-rich repeat 1089..1114 CDD:275380 4/24 (17%)
leucine-rich repeat 1115..1162 CDD:275380 11/46 (24%)
LRR_8 1163..1219 CDD:290566 13/55 (24%)
leucine-rich repeat 1163..1186 CDD:275380 5/22 (23%)
leucine-rich repeat 1187..1210 CDD:275380 5/22 (23%)
leucine-rich repeat 1211..1233 CDD:275380 4/21 (19%)
leucine-rich repeat 1234..1257 CDD:275380 6/22 (27%)
LRR_8 1235..1292 CDD:290566 11/61 (18%)
leucine-rich repeat 1258..1279 CDD:275380 4/25 (16%)
leucine-rich repeat 1282..1306 CDD:275380 2/23 (9%)
CG5819NP_001246458.1 leucine-rich repeat 56..78 CDD:275380 10/43 (23%)
LRR_RI <58..236 CDD:238064 66/298 (22%)
LRR_8 78..141 CDD:290566 26/62 (42%)
leucine-rich repeat 79..102 CDD:275380 11/22 (50%)
leucine-rich repeat 103..130 CDD:275380 11/26 (42%)
leucine-rich repeat 131..155 CDD:275380 9/115 (8%)
LRR_8 156..214 CDD:290566 18/64 (28%)
leucine-rich repeat 158..182 CDD:275380 9/25 (36%)
LRR_8 202..285 CDD:290566 19/107 (18%)
leucine-rich repeat 204..227 CDD:275380 4/22 (18%)
leucine-rich repeat 254..274 CDD:275380 5/44 (11%)
LRR_8 273..333 CDD:290566 26/59 (44%)
leucine-rich repeat 275..298 CDD:275380 7/22 (32%)
LRR_RI 277..>471 CDD:238064 68/226 (30%)
leucine-rich repeat 299..322 CDD:275380 11/22 (50%)
LRR_8 321..402 CDD:290566 27/83 (33%)
leucine-rich repeat 323..346 CDD:275380 7/22 (32%)
leucine-rich repeat 347..391 CDD:275380 17/46 (37%)
leucine-rich repeat 392..413 CDD:275380 6/50 (12%)
LRR_8 393..448 CDD:290566 18/84 (21%)
leucine-rich repeat 414..437 CDD:275380 8/22 (36%)
LRRCT 471..517 CDD:214507 10/54 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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