DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and lbk

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster


Alignment Length:1631 Identity:340/1631 - (20%)
Similarity:555/1631 - (34%) Gaps:534/1631 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 AAKKHKHQTKPTDSE----------CE------GKH------KHKRNRNNVAGVQQHVLRLKLE- 150
            :|.|.:|.|:.::.:          |:      ||:      :.:||.||......:......| 
  Fly     4 SAIKGRHPTRESNDDSSMVISNYRICDIKTSGNGKYLMSWSRRRRRNNNNNNNSSSNNNNAASES 68

  Fly   151 -------------------LQLLLCALLPTALLLGLLPLPPGAAATAMISSAKGSVRELLLTEMG 196
                               |.|:...||.|             |||...|:|:        :...
  Fly    69 RSNDNCNYSTTNDFNKINKLLLITYMLLIT-------------AATICQSAAQ--------SPSS 112

  Fly   197 GGGVGVGVGGSSGGAAHPA---GGGPG----------TGLAGGDGGGAAGIECPSFDNTACPCYK 248
            ..|.|||..||:||:...|   .||..          ..:...:|||::|               
  Fly   113 SNGNGVGGSGSTGGSPLSALLKSGGASYNQQLPQQQLFAMLTRNGGGSSG--------------- 162

  Fly   249 FEDGLFLECPGTTAISLRSTLERISAPIHSLSIYDFDRSVTSLSQDVFQPGVHIRHLQFSHSHLE 313
                     |.::..:...|    ||..|.:::.: |.|    ..||.:..:...|...|.||..
  Fly   163 ---------PRSSGGNRGYT----SARQHFMALSE-DYS----DADVDEEDMAALHYPLSASHPP 209

  Fly   314 ALKDNSLRNVRSSLESLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGLRISKLN 378
            |....|     ||...:||.:|.|                   :.|..|..|.            
  Fly   210 AGVQGS-----SSSSGISIQSGSL-------------------ETNGFVADDG------------ 238

  Fly   379 MKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFP-----LMALRKLDHLRILRLSNNRIPTFYG 438
                   |..|||...||........|.......|     |..|...|.|.:.|:.  .:|::..
  Fly   239 -------GQYEHAQKALEAAAAAAKASNKYNIDCPKDCKCLNVLFDCDKLHLERVP--VLPSYVQ 294

  Fly   439 DIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEA 503
            .:.||.|.                    |:.....||     |....|..:|...|.:|:: |: 
  Fly   295 TLHLANNK--------------------LNDTTVLEI-----RNLLNLTKVSLKRNLLEVI-PK- 332

  Fly   504 FKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIGGVFSNLPQLREVFLSENNIL 568
            |..|..|..|.:::|.|..:..:.......|:|:|||.|.:|||                     
  Fly   333 FIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTI--------------------- 376

  Fly   569 ELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLS 633
            ||  ::|..|.|:..:.|..|.|.:::.:.|:||.||..|.|.:|.:..||:.:|....:|..|:
  Fly   377 EL--NSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLA 439

  Fly   634 LDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTL 698
            |:.|:: ::....||.||.::.::|.:|:||.::.|||..:..::.:.:..|.|..:..|....|
  Fly   440 LNFNQL-EINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNL 503

  Fly   699 ENMQHINLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVE 763
            ..::|:||                                   :|             |.::|:|
  Fly   504 TKLRHLNL-----------------------------------SF-------------NAISRIE 520

  Fly   764 RSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLAR 828
            ...:..|..|..|.||:|.|.:.:......|..|:.|:|:.|:|:.|:.:.|..:::||||:|.|
  Fly   521 VDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRR 585

  Fly   829 NHIE-AIEGYA----FAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFK 888
            |.:. .||..:    |..|:.|:.|||..|.|.|::....|....|..||||:.:|..::.:||:
  Fly   586 NRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNAFE 650

  Fly   889 SLTNLNELNLERNQLNPADIQTLDIPNLRRLLLSHNNFSYAGS---VGIMAGMLDRLRSLQQLSM 950
            .:..||:|..:  .||  .|...|:...::.|  .|.|.....   .|....:||  |.|:.||.
  Fly   651 HMLRLNKLVFK--SLN--FICDCDLVWFQQWL--KNRFPQQAEHAVCGYPEHLLD--RHLKSLSS 707

  Fly   951 SN--C------SLGQIPDLLFAKNTNLVRLDLC----------------------DNRLTQINRN 985
            |.  |      .:.|.||.:.|.|...:.|: |                      ||:..|....
  Fly   708 SELVCVDSPKPRVEQEPDDMLAVNAANITLE-CIASSPTAASLAAADELKIKWRHDNQHVQERPA 771

  Fly   986 IFSGLNVFKELR--LCRNELSDFPHIALYNLSTLESLDLARNQLASIDFF------KLSGTLNLR 1042
            :..|.:...::|  |..|:.|.:.::.|.|: |.||  ..|.|....:.|      |...::.:.
  Fly   772 VHDGASTETQIRHDLSTNQTSIYGYLRLTNV-TYES--AGRYQCVVSNAFGTTYAQKFKISIGIH 833

  Fly  1043 QLILRDNKITALSGFNAVNLTQLDSVDLSGNLLL------SLPANFLRHSINLQKVHLSNNRFLQ 1101
            ...|:......|.......|....|.|.:..:.|      ..||...|   .||.:. ..|.|| 
  Fly   834 PTFLQVPSNLTLDAGEMARLVCSASGDPTPEIALQKFGGSEFPAATER---RLQVIR-EENAFL- 893

  Fly  1102 IPSSALSDVSIPRLSWLNLTGN-PINRIYTVKEERYPYL----KELYICQT----NLSILTSKDF 1157
            |.::..||..|...:.|:..|. .:|....|.::..|.:    :|:.:.:|    .||...:.||
  Fly   894 ITNAKPSDSGIYTCTALSAAGEIKVNATLVVNDKPQPSIPLVHQEVVVGRTCVLQCLSETANADF 958

  Fly  1158 EAFQALQHLH---LVNNRITRISPGA-------FKSLTNLLTLDLSVNELEMLPKERLQGLRLLR 1212
            |    |:|.|   ...|:...|||.|       |.:...||.:                      
  Fly   959 E----LEHPHREWFKENKPIHISPTAPDGDRYYFSNNKELLVI---------------------- 997

  Fly  1213 FLNISHNTLKDLEEFSVDLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFR 1277
             ||...|   |...|..::.:              :.:||                |:.|     
  Fly   998 -LNAQSN---DAGHFRCEITD--------------NSRTF----------------TLQS----- 1023

  Fly  1278 FLRKLHVLDLRKNYFELVPLEPLRPLETNLRTLRLEENPLHCSCDAQKLWEWLRDHRKWSLSMGS 1342
               :|.|:....|:..|:         ..:.|:.:    :....|...:|..|| ::|..|.|..
  Fly  1024 ---ELVVVKENLNWVVLL---------VGIITVTV----ICVVVDCCIIWCTLR-YQKKKLRMSL 1071

  Fly  1343 GAGRGIGGLTGGLGGDSINYLRCEHPTELRGKVFGRMEPQQFCDAPLIPKMAIQDIQPYSVVVSW 1407
            .|.|                    |.|:||        |:...|                     
  Fly  1072 AAER--------------------HSTQLR--------PRSLAD--------------------- 1087

  Fly  1408 QSRDHLGLNGFEIVYHATGDGLVTAGSPTSRERDSLRDIHDPERQRTRDQARERSRERDRDRERD 1472
                 ||.:..|    |....|....:|             |..||..:|....|..|..|.|..
  Fly  1088 -----LGCSYDE----ANHRRLTVMSTP-------------PSEQRCLEQGLTLSYLRQTDLEAQ 1130

  Fly  1473 RERFSIATDEIHGKRLNGTASSTKLTKLSPNTRYHICVIGSGNWLSEPLANALQRLHTNESLREE 1537
            ::..|        .:.:||.|...:.:...:..               :|....:.||::  .||
  Fly  1131 QDHLS--------SKDSGTGSDAAVKRTLDDFE---------------VAMPSHKHHTDD--EEE 1170

  Fly  1538 EAVMMSAPLPESFSPY-QHQHNRNSNGNANPAMVQDHNKKQNPDQDLD-NVVGQDNALMEVLKNS 1600
            |.|  .....|:..|| :|.:      ..|.|..:.|...||.:.:.| ..:|....:.:::.|:
  Fly  1171 EEV--EEVYEENEPPYIKHTY------EVNYAEPEQHLFLQNNNHNYDGGGIGVAGGVNKMVPNA 1227

  Fly  1601 HISACT 1606
            .:..|:
  Fly  1228 LLRKCS 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380 6/21 (29%)
LRR_8 325..384 CDD:290566 9/58 (16%)
leucine-rich repeat 327..350 CDD:275380 4/22 (18%)
leucine-rich repeat 351..461 CDD:275380 20/114 (18%)
LRR_8 373..433 CDD:290566 13/64 (20%)
LRR_RI 397..648 CDD:238064 58/255 (23%)
leucine-rich repeat 399..422 CDD:275380 4/27 (15%)
leucine-rich repeat 462..485 CDD:275380 4/22 (18%)
LRR_8 465..520 CDD:290566 14/54 (26%)
leucine-rich repeat 486..509 CDD:275380 7/22 (32%)
LRR_8 508..567 CDD:290566 13/58 (22%)
leucine-rich repeat 510..533 CDD:275380 4/22 (18%)
LRR_RI 527..785 CDD:238064 61/257 (24%)
leucine-rich repeat 534..556 CDD:275380 9/21 (43%)
LRR_8 555..613 CDD:290566 15/57 (26%)
leucine-rich repeat 557..580 CDD:275380 4/22 (18%)
leucine-rich repeat 581..604 CDD:275380 6/22 (27%)
LRR_8 604..663 CDD:290566 18/58 (31%)
leucine-rich repeat 605..628 CDD:275380 7/22 (32%)
leucine-rich repeat 629..652 CDD:275380 7/22 (32%)
LRR_8 652..711 CDD:290566 14/58 (24%)
leucine-rich repeat 653..676 CDD:275380 7/22 (32%)
leucine-rich repeat 677..700 CDD:275380 4/22 (18%)
leucine-rich repeat 701..748 CDD:275380 4/46 (9%)
leucine-rich repeat 725..736 CDD:275378 0/10 (0%)
leucine-rich repeat 749..772 CDD:275380 4/22 (18%)
LRR_8 771..831 CDD:290566 21/59 (36%)
leucine-rich repeat 773..793 CDD:275380 6/19 (32%)
LRR_RI 804..1076 CDD:238064 79/317 (25%)
LRR_8 821..903 CDD:290566 30/86 (35%)
leucine-rich repeat 821..844 CDD:275380 11/27 (41%)
leucine-rich repeat 845..868 CDD:275380 8/22 (36%)
leucine-rich repeat 869..892 CDD:275380 8/22 (36%)
leucine-rich repeat 893..915 CDD:275380 7/21 (33%)
leucine-rich repeat 916..944 CDD:275380 6/30 (20%)
leucine-rich repeat 945..968 CDD:275380 10/30 (33%)
LRR_8 967..1027 CDD:290566 16/83 (19%)
leucine-rich repeat 969..992 CDD:275380 6/44 (14%)
leucine-rich repeat 993..1014 CDD:275380 5/22 (23%)
LRR_8 1015..1075 CDD:290566 12/65 (18%)
leucine-rich repeat 1017..1040 CDD:275380 6/28 (21%)
leucine-rich repeat 1041..1064 CDD:275380 3/22 (14%)
LRR_RI <1047..1244 CDD:238064 45/221 (20%)
LRR_8 1063..1125 CDD:290566 17/68 (25%)
leucine-rich repeat 1089..1114 CDD:275380 9/24 (38%)
leucine-rich repeat 1115..1162 CDD:275380 12/55 (22%)
LRR_8 1163..1219 CDD:290566 13/65 (20%)
leucine-rich repeat 1163..1186 CDD:275380 9/32 (28%)
leucine-rich repeat 1187..1210 CDD:275380 2/22 (9%)
leucine-rich repeat 1211..1233 CDD:275380 5/21 (24%)
leucine-rich repeat 1234..1257 CDD:275380 2/22 (9%)
LRR_8 1235..1292 CDD:290566 7/56 (13%)
leucine-rich repeat 1258..1279 CDD:275380 2/20 (10%)
leucine-rich repeat 1282..1306 CDD:275380 4/23 (17%)
lbkNP_611091.2 LRR_RI <275..446 CDD:238064 55/223 (25%)
leucine-rich repeat 293..316 CDD:275380 7/47 (15%)
LRR_8 316..373 CDD:290566 17/58 (29%)
leucine-rich repeat 317..338 CDD:275380 7/22 (32%)
leucine-rich repeat 339..362 CDD:275380 4/22 (18%)
leucine-rich repeat 363..386 CDD:275380 13/45 (29%)
LRR_8 386..445 CDD:290566 19/58 (33%)
leucine-rich repeat 387..410 CDD:275380 6/22 (27%)
leucine-rich repeat 411..434 CDD:275380 7/22 (32%)
leucine-rich repeat 435..457 CDD:275380 7/22 (32%)
LRR_8 457..516 CDD:290566 16/106 (15%)
leucine-rich repeat 458..481 CDD:275380 7/22 (32%)
leucine-rich repeat 482..505 CDD:275380 4/22 (18%)
LRR_RI <498..669 CDD:238064 57/222 (26%)
LRR_8 504..564 CDD:290566 19/107 (18%)
leucine-rich repeat 506..529 CDD:275380 8/70 (11%)
leucine-rich repeat 530..553 CDD:275380 7/22 (32%)
leucine-rich repeat 554..577 CDD:275380 7/22 (32%)
LRR_8 576..641 CDD:290566 24/64 (38%)
leucine-rich repeat 578..604 CDD:275380 10/25 (40%)
leucine-rich repeat 607..630 CDD:275380 8/22 (36%)
leucine-rich repeat 631..652 CDD:275380 8/20 (40%)
LRRCT 665..712 CDD:214507 13/50 (26%)
IG 734..823 CDD:214652 18/92 (20%)
Ig 735..823 CDD:143165 18/91 (20%)
I-set 834..924 CDD:254352 21/94 (22%)
Ig 851..924 CDD:299845 19/77 (25%)
IG 936..1027 CDD:214652 28/158 (18%)
Ig 961..1020 CDD:143165 17/114 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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