DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and CG14762

DIOPT Version :10

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster


Alignment Length:480 Identity:122/480 - (25%)
Similarity:196/480 - (40%) Gaps:109/480 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 LDFDYNEIVRVDDYSFYGLRISKLNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFPLMALR 418
            |...:|.:.::..:.|..|.|..|.:..:.|..:.|:|.:.|...:.::|||.|.::|.|..||:
  Fly    86 LKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQ 150

  Fly   419 KLDHLRILRLSNNRIPTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAF 483
            .|.||.||.|::|:|...:       |||                                |...
  Fly   151 HLFHLLILNLNHNKITVIH-------NNA--------------------------------FEGL 176

  Fly   484 PQLKTLSFYANQIELVQPEAFKSLRE-LMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTI 547
            ..|:.|:.|.|:|..:.||||:.|.: :..|::..|.:..:..|.......|:.:::..|.|.||
  Fly   177 ETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTI 241

  Fly   548 G-GVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTL-VNLDHLYL 610
            . |.|..|..|..:.|:.|.|..:||:.|::.|.::.:.||.|.|:.||.:.|..| .||.  ||
  Fly   242 SEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQ--YL 304

  Fly   611 RSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPL- 674
            |                      |.:|:|..:.....|.|..||.:.|.||.|..:....|... 
  Fly   305 R----------------------LGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFG 347

  Fly   675 PSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQL-TVLEDIFPDENSSLLSVQLEANYLHKV 738
            .||..|::|||.|:.:....|..|.:::.:|||:|:| .:.:||......:|             
  Fly   348 DSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVIDTL------------- 399

  Fly   739 HPRTFSRQQKVQIMWLKDNQLT-RVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDL 802
                       :|:.:.||.|. ..|.::|   |:|    |.|.|.:|.|.......|....|| 
  Fly   400 -----------RIIDITDNPLNCSCELTWF---PKL----LEDLKNKDDEMSQKKKPLCHMSLD- 445

  Fly   803 SGNQLRQLRRDYFAPLQDLEELSLA 827
                    .|:||......|::..|
  Fly   446 --------NREYFVQAMPTEKMHCA 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 LRR <301..606 CDD:443914 68/254 (27%)
leucine-rich repeat 303..325 CDD:275380
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380 29/106 (27%)
leucine-rich repeat 399..422 CDD:275380 9/22 (41%)
leucine-rich repeat 462..485 CDD:275380 1/22 (5%)
LRR 486..>736 CDD:443914 71/254 (28%)
leucine-rich repeat 486..509 CDD:275380 10/22 (45%)
leucine-rich repeat 510..533 CDD:275380 3/22 (14%)
leucine-rich repeat 534..556 CDD:275380 8/22 (36%)
leucine-rich repeat 557..580 CDD:275380 7/22 (32%)
leucine-rich repeat 581..604 CDD:275380 8/23 (35%)
leucine-rich repeat 605..628 CDD:275380 4/22 (18%)
PPP1R42 627..860 CDD:455733 50/204 (25%)
leucine-rich repeat 629..652 CDD:275380 5/22 (23%)
leucine-rich repeat 653..676 CDD:275380 7/23 (30%)
leucine-rich repeat 677..700 CDD:275380 8/22 (36%)
leucine-rich repeat 701..748 CDD:275380 8/47 (17%)
leucine-rich repeat 725..736 CDD:275378 1/10 (10%)
leucine-rich repeat 749..772 CDD:275380 6/23 (26%)
leucine-rich repeat 773..793 CDD:275380 6/19 (32%)
leucine-rich repeat 821..844 CDD:275380 2/7 (29%)
leucine-rich repeat 845..868 CDD:275380
LRR 869..1226 CDD:443914
leucine-rich repeat 869..892 CDD:275380
leucine-rich repeat 893..915 CDD:275380
leucine-rich repeat 916..944 CDD:275380
leucine-rich repeat 945..968 CDD:275380
leucine-rich repeat 969..992 CDD:275380
leucine-rich repeat 993..1014 CDD:275380
leucine-rich repeat 1017..1040 CDD:275380
leucine-rich repeat 1041..1064 CDD:275380
leucine-rich repeat 1089..1114 CDD:275380
leucine-rich repeat 1115..1162 CDD:275380
PPP1R42 1155..1317 CDD:455733
leucine-rich repeat 1163..1186 CDD:275380
leucine-rich repeat 1187..1210 CDD:275380
leucine-rich repeat 1211..1233 CDD:275380
leucine-rich repeat 1234..1257 CDD:275380
leucine-rich repeat 1258..1279 CDD:275380
leucine-rich repeat 1282..1306 CDD:275380
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 3/18 (17%)
leucine-rich repeat 107..129 CDD:275380 5/21 (24%)
LRR <131..410 CDD:443914 94/365 (26%)
leucine-rich repeat 131..154 CDD:275380 9/22 (41%)
leucine-rich repeat 155..178 CDD:275380 10/61 (16%)
leucine-rich repeat 179..203 CDD:275380 10/23 (43%)
leucine-rich repeat 204..227 CDD:275380 3/22 (14%)
leucine-rich repeat 228..251 CDD:275380 8/22 (36%)
leucine-rich repeat 252..275 CDD:275380 7/22 (32%)
leucine-rich repeat 276..300 CDD:275380 8/23 (35%)
leucine-rich repeat 301..324 CDD:275380 9/46 (20%)
leucine-rich repeat 325..349 CDD:275380 7/23 (30%)
leucine-rich repeat 350..373 CDD:275380 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.

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