DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and CG16974

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_001246018.1 Gene:CG16974 / 34713 FlyBaseID:FBgn0032479 Length:1257 Species:Drosophila melanogaster


Alignment Length:1347 Identity:299/1347 - (22%)
Similarity:489/1347 - (36%) Gaps:352/1347 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 ADAFTNSTNVDVIYLESNAIAHIDP--NVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSL 634
            |||  .|.:|:|...|..::.|:||  |||.  :|.:|:.||.....||         ...|..:
  Fly    99 ADA--GSESVEVEEHELPSVGHVDPTGNVFK--LNCEHVDLRRVNQELL---------SQRSSHI 150

  Fly   635 DNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIED--------IE 691
            :.|::.         |.|:...|  :|.::      ...|.||:|...|.:.::|        .:
  Fly   151 NYNQLM---------LAHVPADR--SNPLK------LPQLESLREFSWQSSELKDETLMELFTRQ 198

  Fly   692 PQAFHTLENMQHINLQDNQLTVLEDIFP---------------DENSSLLSVQ---------LEA 732
            |::|   |.|:.:||.:|:|..|....|               ..|.|||::|         |:.
  Fly   199 PRSF---EYMERLNLAENRLECLHWAIPLAVRRVKVLEMSGNRLSNCSLLNLQYMKQLQELHLDR 260

  Fly   733 NYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLL 797
            :.|..:..|......:::::.|..|.||.:.|..|....:|.|||||.|::..:....|.....|
  Fly   261 SELTYLPQRFLGELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAADL 325

  Fly   798 QFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDI 862
            |.||||.|:|.....::||....|.:|.|.||.:::|..::...|:.|:.||||.|.|..:.|..
  Fly   326 QVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKA 390

  Fly   863 FSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLN--PADIQTLDIPNLRRLLLSH-- 923
            |.:...|.:||:...:|..|....|:||..|.:|:|.|||..  |:.:    ....|.|:|..  
  Fly   391 FESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGL----FQRQRSLVLLRID 451

  Fly   924 ----NNFS-----YAGSVGIMAGMLDRLR--SLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDN 977
                ..||     |..|: :...:|.|||  |:||    |..|..:|..|||...|:..|.|.:|
  Fly   452 ETPIEQFSNWISRYDESL-VDPQVLHRLRYLSVQQ----NRKLTYLPATLFANTPNIRELLLAEN 511

  Fly   978 RLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQL-ASIDFFKLSGTLNL 1041
            .|.|:...| |||:..:.|.:..|.|...|. .:..|..|..|::..|:. .....:.|:..|..
  Fly   512 GLLQLPTQI-SGLSRLQRLSVRGNSLGSLPE-NIKELRQLHYLNILGNEYQCDCSMYWLTAWLAN 574

  Fly  1042 RQLILRDNKITALSGFN-AVNLTQLDSVDLSGNLLLSLPANF------LRHSINLQ--------- 1090
            ....||.....|.:..| :.|.|.|||.:...:.:.:|...:      ||....|.         
  Fly   575 TSTSLRHQMPQAQNHSNGSTNQTPLDSYESIDHQIDALKCQYGYRGDMLRVLSKLNCSVPTVVQF 639

  Fly  1091 ---KVH--LSNNRF-LQIPSSALSDV--SIPRLSWLNLTGNPINR--IYTVKEERY--PYLKELY 1143
               |:|  ||..:. .||..|.:.|:  ..||...|....:|..|  |...||:.:  |..:|| 
  Fly   640 SEPKMHKLLSTAKLECQISGSPVPDIIWVTPRNKILRHHADPDKRPIIIDSKEDAHQPPSAQEL- 703

  Fly  1144 ICQTNLSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLD---LSVNELEMLPKERL 1205
                 .:::.....::....:...||..|:..:..|:. .:.|:..:|   .:.....::.|.. 
  Fly   704 -----AALMDESYIQSLNWTRQNSLVGRRVVLVENGSL-LVHNISRIDSGLYTCYAFNVMGKAS- 761

  Fly  1206 QGLRL----LRFLNISHNTLKDLEEFSVDLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGN 1266
            .||||    :.|..:...:          :|....|..:|..|..|    .:.|...|..:.:.|
  Fly   762 AGLRLYIDPIVFYRVKIGS----------ILFGTALATAFLLLTLI----VQGLRSCLSRWGICN 812

  Fly  1267 RMTVLSNDAFRFLRKLHV---LDLRKNYFELVPLEPLRPLETNLRTLRLEENPLHCSCDAQKLWE 1328
            |.....|...:..||..:   ||..:.| :...||.||...|. :..|:.||     | ||:: |
  Fly   813 RFYCCVNRKKKSPRKHQIYAMLDSIETY-KSQQLERLRENYTQ-QVHRIREN-----C-AQQV-E 868

  Fly  1329 WLRDHRKWSLSMGSGAG-----RGIGGLTGGLGGDSINYLRCEHPTELRGKVFGRMEPQQFCDAP 1388
            |::.      |..|.|.     |.||.               .|.|.|:.:.:.:          
  Fly   869 WIQS------SYTSQAKHIREFRDIGS---------------NHLTTLKDQYYDQ---------- 902

  Fly  1389 LIPKMAIQDIQPYSV-VVSWQSRDHLGLNGFEIVYHATGDGLVTAGSPTSRERDSLRDIHDPERQ 1452
                  ::.::.||. .:||...:::                        .:|:.:|.....:..
  Fly   903 ------VKKVRDYSTGQLSWVRENYV------------------------FQRNKIRKFSAHQVL 937

  Fly  1453 RTRDQARERSRERDRDRE----------RDRERFSIATD---------------EIHGKRL---- 1488
            |.|:..:.:.:..::..|          |.|....||.|               |:|.:::    
  Fly   938 RLREGYKYQQQTLNKVLENLPSFYFENCRGRCEEDIAEDIDCYFKGQMDFGDSKELHIQKIKARL 1002

  Fly  1489 --NGTASSTKLTKLSP-------------NTRYHICVIGSGNWLSEPLANALQRLHTNESLREEE 1538
              |.:||...|....|             |:..||      |::.|.|....|..|  :...|.:
  Fly  1003 SANYSASKASLYYTPPDDDLLHSSQLNLQNSPIHI------NYIDENLDQQKQLEH--DFKMEPQ 1059

  Fly  1539 AVMMSAPLPESFSPYQHQHNRNSNGNANP----------AMVQDHNKKQNPDQDLDNVVGQDNAL 1593
            .::.:|.:     .|.:....:|:|.|..          ..|:|:|::|.. |.|..:.|:...:
  Fly  1060 LLLYNASM-----LYMNPEGASSSGQAAALAAAGALSQFISVEDNNQEQEM-QPLRKISGKPLGM 1118

  Fly  1594 MEVLKNSHISACTDVQTLDSTPSLVTDENGLSSNGFIHSILTRRLGLIVGCCLGIIVFIVMISVL 1658
            .| ||:     ..||:|..|.|:             |:.:..:|.|                |.|
  Fly  1119 PE-LKD-----LNDVKTSKSCPA-------------IYKVSKQRDG----------------STL 1148

  Fly  1659 ---------SYVKLKKKRIENAKRQAALPPEYISYRHFSIPNEELTRTAANAGTVAAAAAANNSH 1714
                     .|..|:...:|.....:.:.|.      .....|:|.......||.:...|.....
  Fly  1149 HELQKEGEAPYQMLRINPVETTSLTSTVAPV------MQARTEKLNIILDECGTASLCKAEQEGD 1207

  Fly  1715 NSNNSTDEGSSPHMSSVPSGISAHISGTSLSTGGTGTGSTTTTATTP 1761
            ..|:.|    .|..||..|...|...|.............:..:|.|
  Fly  1208 AGNSET----PPSESSCESNSLAASCGDVCQVSSKLANDASLPSTPP 1250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380
LRR_8 373..433 CDD:290566
LRR_RI 397..648 CDD:238064 21/77 (27%)
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 462..485 CDD:275380
LRR_8 465..520 CDD:290566
leucine-rich repeat 486..509 CDD:275380
LRR_8 508..567 CDD:290566
leucine-rich repeat 510..533 CDD:275380
LRR_RI 527..785 CDD:238064 62/246 (25%)
leucine-rich repeat 534..556 CDD:275380
LRR_8 555..613 CDD:290566 17/42 (40%)
leucine-rich repeat 557..580 CDD:275380 4/7 (57%)
leucine-rich repeat 581..604 CDD:275380 9/24 (38%)
LRR_8 604..663 CDD:290566 12/58 (21%)
leucine-rich repeat 605..628 CDD:275380 5/22 (23%)
leucine-rich repeat 629..652 CDD:275380 3/22 (14%)
LRR_8 652..711 CDD:290566 16/66 (24%)
leucine-rich repeat 653..676 CDD:275380 3/22 (14%)
leucine-rich repeat 677..700 CDD:275380 6/30 (20%)
leucine-rich repeat 701..748 CDD:275380 15/70 (21%)
leucine-rich repeat 725..736 CDD:275378 4/19 (21%)
leucine-rich repeat 749..772 CDD:275380 6/22 (27%)
LRR_8 771..831 CDD:290566 23/59 (39%)
leucine-rich repeat 773..793 CDD:275380 8/19 (42%)
LRR_RI 804..1076 CDD:238064 84/288 (29%)
LRR_8 821..903 CDD:290566 29/81 (36%)
leucine-rich repeat 821..844 CDD:275380 7/22 (32%)
leucine-rich repeat 845..868 CDD:275380 9/22 (41%)
leucine-rich repeat 869..892 CDD:275380 8/22 (36%)
leucine-rich repeat 893..915 CDD:275380 7/23 (30%)
leucine-rich repeat 916..944 CDD:275380 11/40 (28%)
leucine-rich repeat 945..968 CDD:275380 8/22 (36%)
LRR_8 967..1027 CDD:290566 18/59 (31%)
leucine-rich repeat 969..992 CDD:275380 9/22 (41%)
leucine-rich repeat 993..1014 CDD:275380 4/20 (20%)
LRR_8 1015..1075 CDD:290566 14/61 (23%)
leucine-rich repeat 1017..1040 CDD:275380 4/23 (17%)
leucine-rich repeat 1041..1064 CDD:275380 5/23 (22%)
LRR_RI <1047..1244 CDD:238064 46/231 (20%)
LRR_8 1063..1125 CDD:290566 19/84 (23%)
leucine-rich repeat 1089..1114 CDD:275380 9/41 (22%)
leucine-rich repeat 1115..1162 CDD:275380 9/50 (18%)
LRR_8 1163..1219 CDD:290566 12/62 (19%)
leucine-rich repeat 1163..1186 CDD:275380 4/22 (18%)
leucine-rich repeat 1187..1210 CDD:275380 4/25 (16%)
leucine-rich repeat 1211..1233 CDD:275380 1/21 (5%)
leucine-rich repeat 1234..1257 CDD:275380 5/22 (23%)
LRR_8 1235..1292 CDD:290566 13/59 (22%)
leucine-rich repeat 1258..1279 CDD:275380 4/20 (20%)
leucine-rich repeat 1282..1306 CDD:275380 7/26 (27%)
CG16974NP_001246018.1 leucine-rich repeat 206..228 CDD:275380 6/21 (29%)
leucine-rich repeat 229..252 CDD:275380 5/22 (23%)
LRR_RI <246..433 CDD:238064 58/186 (31%)
LRR_8 251..311 CDD:290566 16/59 (27%)
leucine-rich repeat 253..276 CDD:275380 3/22 (14%)
leucine-rich repeat 277..300 CDD:275380 6/22 (27%)
leucine-rich repeat 301..324 CDD:275380 8/22 (36%)
LRR_8 325..383 CDD:290566 23/57 (40%)
leucine-rich repeat 325..348 CDD:275380 10/22 (45%)
leucine-rich repeat 349..372 CDD:275380 7/22 (32%)
LRR_RI 351..>557 CDD:238064 67/216 (31%)
LRR_8 371..431 CDD:290566 22/59 (37%)
leucine-rich repeat 373..396 CDD:275380 9/22 (41%)
leucine-rich repeat 397..420 CDD:275380 8/22 (36%)
leucine-rich repeat 421..444 CDD:275380 7/26 (27%)
LRR_8 477..536 CDD:290566 24/63 (38%)
leucine-rich repeat 478..502 CDD:275380 11/27 (41%)
leucine-rich repeat 503..526 CDD:275380 9/23 (39%)
Ig <714..761 CDD:299845 7/47 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453702
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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