DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42346 and Tlr7

DIOPT Version :10

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:XP_017457568.1 Gene:Tlr7 / 317468 RGDID:1563357 Length:1068 Species:Rattus norvegicus


Alignment Length:1012 Identity:246/1012 - (24%)
Similarity:406/1012 - (40%) Gaps:236/1012 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 FPLMALRKLDHLRILRLSNNRI-------PTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDLSS 469
            ||:..|::...:.:..:..:|:       .|...|:.|.:.|..              :.:|.:.
  Rat    21 FPMWTLKRQSFIFLNMILVSRVLGFRWYPKTLPCDVSLDSTNTH--------------VIVDCTD 71

  Fly   470 NQFAEIGPDCFRAFPQLKT-LSFYANQIELVQPEAFKSLRELMSLDMSHNRI-IGLDPKVFEKNK 532
            ....|| |:   ..|...| |:...|.|..:.|::|..|:.|..||:..|.: |.|..|.....|
  Rat    72 KHLTEI-PE---GIPTNTTNLTLTINHIPSISPDSFHRLKHLEELDLRCNCVPILLGSKANVCTK 132

  Fly   533 RLQTVDLSHNHIHTIGGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPN 597
            |||...          |.||.|..|:.::|..|.:||:|.|.   .:::.::.||:|.|..|...
  Rat   133 RLQIRP----------GSFSGLSDLKSLYLDGNQLLEIPQDL---PSSLQLLSLEANNIFSITKE 184

  Fly   598 VFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNR 662
            ..|.|||::.|||..|.....|.                |....:|...|..:::|:.:.|.:|.
  Rat   185 NLSELVNIESLYLGQNCYYRNPC----------------NVSYSIEKDAFLVMKNLKVLSLKDNN 233

  Fly   663 IRRVRRGVFEPL---PSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDN---QLTVLEDIFPDE 721
            :..|      |.   |:|.||::..|.|:.|:...|:.|..:|.::|..|   ...|.....|.|
  Rat   234 VTAV------PTILPPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCPRCYNVPYPCTPCE 292

  Fly   722 NSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKI-RD 785
            |:|.|          ::|...|....:::::.|..|.|..|...:|.:...|..|.||.|.: |:
  Rat   293 NNSPL----------QIHDNAFDSLTELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYLARE 347

  Fly   786 IEKDTFVNLL--LLQFLDLSGNQLRQLRRDYFAPL---QDLEELSLARNHIEAIEGYAFAKLKNL 845
            ||:..|:|.|  |:| ||||.|...|:   |.|.:   ..|..|:..:|..  |:||.|.:||: 
  Rat   348 IEEAKFLNSLPNLVQ-LDLSFNYELQV---YHASITLPHSLSSLTKLKNLY--IKGYVFKELKD- 405

  Fly   846 KSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQT 910
            .||.:.||         .||   |..|:||...::..:.:.|:...||..::|..|:::|:: ::
  Rat   406 SSLSVLHN---------LSN---LEVLDLGTNFIKIADLNIFQQFENLKFIDLSVNKISPSE-ES 457

  Fly   911 LDI---PNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRL 972
            .::   ||.:..:..|.                                  |.:|.|  .:..|.
  Rat   458 REVGLCPNAQTSVDWHG----------------------------------PQVLEA--LHYFRY 486

  Fly   973 D----LCDNRLTQINRNIFSGLNV-----FKELRLCRNEL-----SDFPHIALYNLSTLESLDLA 1023
            |    .|  |........|..||.     .|.|.|.||.:     |||.|     ||.|:.|:|:
  Rat   487 DEYARSC--RFKNKEPPTFLPLNADCHTYGKTLDLSRNNIFFIKPSDFKH-----LSFLKCLNLS 544

  Fly  1024 RNQLA-SIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLL------LSLPAN 1081
            .|.:. :::..:|.....||.|...:|::..|.......|..|:.:|||.|..      ::...|
  Rat   545 GNAIGQTLNGSELQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSNSHYFQAEGITHMLN 609

  Fly  1082 FLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERY-PYLKELYIC 1145
            |.:...:|:|:.:::|   .|.:||...:....|..|...||.::.::...:.|| .:.|.|.  
  Rat   610 FTKKLRHLEKLMMNDN---DISTSASRTMESESLRVLEFRGNHLDVLWRDGDNRYLDFFKNLL-- 669

  Fly  1146 QTNLSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSL-TNLLTLDLSVNELEMLPKERLQGLR 1209
                            .|:.|.:..|.:..:.||.|:.: .||.||.|:.|.|......|||.|:
  Rat   670 ----------------NLEELDISRNSLNSVPPGVFEGMPPNLTTLSLAKNGLRSFSWGRLQLLK 718

  Fly  1210 LLRFLNISHNTLKDLEEFSVDLLEMQT-LDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSN 1273
            .|:.|::|||.|..:.....:..:..| |.|:.||:.:::|....:...|..|.:..|::.|:..
  Rat   719 HLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKIQVIQK 783

  Fly  1274 DAFRFLRKLHVLDLRKNYFELVPLEPLRPLETNLRTLRLEENPLHCSCDAQKLW-EWLRDHRKWS 1337
            .:|                      |...| .||..|.|..|...|:|||  :| .|..:|...:
  Rat   784 TSF----------------------PENVL-NNLNMLLLHHNRFLCNCDA--VWFVWWVNHTDVT 823

  Fly  1338 L--------SMGSGAGRGIGGLTGGLGGDSINYLRCE 1366
            :        ..|.||.:|...:       |::...||
  Rat   824 IPYLATDVTCAGPGAHKGQSVI-------SLDLYTCE 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 LRR <301..606 CDD:443914 51/202 (25%)
leucine-rich repeat 303..325 CDD:275380
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380 8/55 (15%)
leucine-rich repeat 399..422 CDD:275380 3/9 (33%)
leucine-rich repeat 462..485 CDD:275380 4/22 (18%)
LRR 486..>736 CDD:443914 69/257 (27%)
leucine-rich repeat 486..509 CDD:275380 7/23 (30%)
leucine-rich repeat 510..533 CDD:275380 7/23 (30%)
leucine-rich repeat 534..556 CDD:275380 6/21 (29%)
leucine-rich repeat 557..580 CDD:275380 7/22 (32%)
leucine-rich repeat 581..604 CDD:275380 7/22 (32%)
leucine-rich repeat 605..628 CDD:275380 5/22 (23%)
PPP1R42 627..860 CDD:455733 67/244 (27%)
leucine-rich repeat 629..652 CDD:275380 3/22 (14%)
leucine-rich repeat 653..676 CDD:275380 5/25 (20%)
leucine-rich repeat 677..700 CDD:275380 8/22 (36%)
leucine-rich repeat 701..748 CDD:275380 11/49 (22%)
leucine-rich repeat 725..736 CDD:275378 1/10 (10%)
leucine-rich repeat 749..772 CDD:275380 5/22 (23%)
leucine-rich repeat 773..793 CDD:275380 9/20 (45%)
leucine-rich repeat 821..844 CDD:275380 8/22 (36%)
leucine-rich repeat 845..868 CDD:275380 6/22 (27%)
LRR 869..1226 CDD:443914 89/382 (23%)
leucine-rich repeat 869..892 CDD:275380 5/22 (23%)
leucine-rich repeat 893..915 CDD:275380 4/24 (17%)
leucine-rich repeat 916..944 CDD:275380 1/27 (4%)
leucine-rich repeat 945..968 CDD:275380 3/22 (14%)
leucine-rich repeat 969..992 CDD:275380 6/26 (23%)
leucine-rich repeat 993..1014 CDD:275380 9/25 (36%)
leucine-rich repeat 1017..1040 CDD:275380 5/23 (22%)
leucine-rich repeat 1041..1064 CDD:275380 6/22 (27%)
leucine-rich repeat 1089..1114 CDD:275380 6/24 (25%)
leucine-rich repeat 1115..1162 CDD:275380 8/47 (17%)
PPP1R42 1155..1317 CDD:455733 41/163 (25%)
leucine-rich repeat 1163..1186 CDD:275380 6/23 (26%)
leucine-rich repeat 1187..1210 CDD:275380 10/22 (45%)
leucine-rich repeat 1211..1233 CDD:275380 6/21 (29%)
leucine-rich repeat 1234..1257 CDD:275380 6/23 (26%)
leucine-rich repeat 1258..1279 CDD:275380 5/20 (25%)
leucine-rich repeat 1282..1306 CDD:275380 2/23 (9%)
Tlr7XP_017457568.1 leucine-rich repeat 66..87 CDD:275380 5/24 (21%)
LRR_8 93..157 CDD:404697 23/73 (32%)
leucine-rich repeat 109..146 CDD:275380 15/46 (33%)
LRR 142..>452 CDD:443914 101/363 (28%)
leucine-rich repeat 147..191 CDD:275380 14/46 (30%)
leucine-rich repeat 192..223 CDD:275380 8/46 (17%)
PLN00113 208..>752 CDD:215061 161/643 (25%)
leucine-rich repeat 224..244 CDD:275380 5/25 (20%)
leucine-rich repeat 245..268 CDD:275380 8/22 (36%)
leucine-rich repeat 269..309 CDD:275380 11/49 (22%)
leucine-rich repeat 310..333 CDD:275380 5/22 (23%)
leucine-rich repeat 334..359 CDD:275380 11/24 (46%)
leucine-rich repeat 370..389 CDD:275380 5/21 (24%)
leucine-rich repeat 390..416 CDD:275380 11/37 (30%)
leucine-rich repeat 417..440 CDD:275380 5/22 (23%)
leucine-rich repeat 515..537 CDD:275380 10/26 (38%)
leucine-rich repeat 538..562 CDD:275380 5/23 (22%)
leucine-rich repeat 563..586 CDD:275380 6/22 (27%)
leucine-rich repeat 587..616 CDD:275380 7/28 (25%)
leucine-rich repeat 617..639 CDD:275380 6/24 (25%)
leucine-rich repeat 640..670 CDD:275380 8/47 (17%)
leucine-rich repeat 671..695 CDD:275380 6/23 (26%)
leucine-rich repeat 696..719 CDD:275380 10/22 (45%)
leucine-rich repeat 720..743 CDD:275380 6/22 (27%)
LRR_8 743..>786 CDD:404697 10/42 (24%)
leucine-rich repeat 768..786 CDD:275380 4/17 (24%)
TIR 909..1054 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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