Sequence 1: | NP_001036303.2 | Gene: | CG42346 / 3355160 | FlyBaseID: | FBgn0259677 | Length: | 1817 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001008339.2 | Gene: | Lrrc8d / 305131 | RGDID: | 1309601 | Length: | 860 | Species: | Rattus norvegicus |
Alignment Length: | 955 | Identity: | 191/955 - (20%) |
---|---|---|---|
Similarity: | 333/955 - (34%) | Gaps: | 346/955 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 412 FPLMALRKLDHLRILRLSNNRIPTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIG 476
Fly 477 PDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSH 541
Fly 542 NHIHTI---GGVFSNLPQLREV---FLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFS 600
Fly 601 TLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRR 665
Fly 666 VRRGVFEPLPSLQELHIQKNSIEDIE-------PQAFHTLENMQHI-NLQDNQLTVLEDIFPDEN 722
Fly 723 SSLLSVQLEANYLHKVHPRTFSRQQKVQIMW-----LKDNQLTRV-ERSFFADTP---------- 771
Fly 772 ----QLGRLY----------LSDNKIRDIEKD---TFVNLLLLQFLDLSGNQLRQLRRDYFAPLQ 819
Fly 820 DLEELSLARNHIEAIEGY--AFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKL 882
Fly 883 EQHAFKSLTNLNELNLERNQLNPADIQTLDI----------PNLRRLLL-----SHNNFSYAGSV 932
Fly 933 GIMAGMLDRLRSLQQLSMSN--CSLGQIPDLLFAKNTNLVRLDLCDN--RLTQINRNIFSGLNVF 993
Fly 994 KELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALSGFN 1058
Fly 1059 AVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGN 1123
Fly 1124 PINRIYTVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLL 1188
Fly 1189 TLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFSVDLLEMQTLDLSFNQLDRISKKTFR 1253
Fly 1254 NLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYFELVPLE 1298 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42346 | NP_001036303.2 | leucine-rich repeat | 303..325 | CDD:275380 | |
LRR_8 | 325..384 | CDD:290566 | |||
leucine-rich repeat | 327..350 | CDD:275380 | |||
leucine-rich repeat | 351..461 | CDD:275380 | 11/48 (23%) | ||
LRR_8 | 373..433 | CDD:290566 | 9/20 (45%) | ||
LRR_RI | 397..648 | CDD:238064 | 36/241 (15%) | ||
leucine-rich repeat | 399..422 | CDD:275380 | 4/9 (44%) | ||
leucine-rich repeat | 462..485 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 465..520 | CDD:290566 | 10/54 (19%) | ||
leucine-rich repeat | 486..509 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 508..567 | CDD:290566 | 10/64 (16%) | ||
leucine-rich repeat | 510..533 | CDD:275380 | 2/22 (9%) | ||
LRR_RI | 527..785 | CDD:238064 | 45/301 (15%) | ||
leucine-rich repeat | 534..556 | CDD:275380 | 3/24 (13%) | ||
LRR_8 | 555..613 | CDD:290566 | 5/60 (8%) | ||
leucine-rich repeat | 557..580 | CDD:275380 | 4/25 (16%) | ||
leucine-rich repeat | 581..604 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 604..663 | CDD:290566 | 9/58 (16%) | ||
leucine-rich repeat | 605..628 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 629..652 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 652..711 | CDD:290566 | 8/66 (12%) | ||
leucine-rich repeat | 653..676 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 677..700 | CDD:275380 | 3/29 (10%) | ||
leucine-rich repeat | 701..748 | CDD:275380 | 8/47 (17%) | ||
leucine-rich repeat | 725..736 | CDD:275378 | 2/10 (20%) | ||
leucine-rich repeat | 749..772 | CDD:275380 | 9/42 (21%) | ||
LRR_8 | 771..831 | CDD:290566 | 17/86 (20%) | ||
leucine-rich repeat | 773..793 | CDD:275380 | 9/32 (28%) | ||
LRR_RI | 804..1076 | CDD:238064 | 73/292 (25%) | ||
LRR_8 | 821..903 | CDD:290566 | 23/83 (28%) | ||
leucine-rich repeat | 821..844 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 845..868 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 869..892 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 893..915 | CDD:275380 | 3/31 (10%) | ||
leucine-rich repeat | 916..944 | CDD:275380 | 11/32 (34%) | ||
leucine-rich repeat | 945..968 | CDD:275380 | 4/24 (17%) | ||
LRR_8 | 967..1027 | CDD:290566 | 21/61 (34%) | ||
leucine-rich repeat | 969..992 | CDD:275380 | 4/24 (17%) | ||
leucine-rich repeat | 993..1014 | CDD:275380 | 8/20 (40%) | ||
LRR_8 | 1015..1075 | CDD:290566 | 12/59 (20%) | ||
leucine-rich repeat | 1017..1040 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 1041..1064 | CDD:275380 | 2/22 (9%) | ||
LRR_RI | <1047..1244 | CDD:238064 | 40/196 (20%) | ||
LRR_8 | 1063..1125 | CDD:290566 | 15/61 (25%) | ||
leucine-rich repeat | 1089..1114 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 1115..1162 | CDD:275380 | 6/46 (13%) | ||
LRR_8 | 1163..1219 | CDD:290566 | 13/55 (24%) | ||
leucine-rich repeat | 1163..1186 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 1187..1210 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 1211..1233 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 1234..1257 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 1235..1292 | CDD:290566 | 10/56 (18%) | ||
leucine-rich repeat | 1258..1279 | CDD:275380 | 2/20 (10%) | ||
leucine-rich repeat | 1282..1306 | CDD:275380 | 4/17 (24%) | ||
Lrrc8d | NP_001008339.2 | Pannexin_like | 3..386 | CDD:289311 | 52/352 (15%) |
leucine-rich repeat | 517..538 | CDD:275378 | 10/30 (33%) | ||
LRR_RI | 557..834 | CDD:238064 | 87/388 (22%) | ||
leucine-rich repeat | 564..591 | CDD:275380 | 13/35 (37%) | ||
leucine-rich repeat | 592..617 | CDD:275380 | 4/24 (17%) | ||
LRR_8 | 638..697 | CDD:290566 | 23/83 (28%) | ||
leucine-rich repeat | 639..661 | CDD:275380 | 10/23 (43%) | ||
leucine-rich repeat | 662..686 | CDD:275380 | 8/46 (17%) | ||
LRR_8 | 685..743 | CDD:290566 | 15/61 (25%) | ||
leucine-rich repeat | 687..709 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 710..732 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 733..755 | CDD:275380 | 6/46 (13%) | ||
LRR_8 | 755..810 | CDD:290566 | 19/79 (24%) | ||
leucine-rich repeat | 756..778 | CDD:275380 | 9/45 (20%) | ||
leucine-rich repeat | 779..801 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 802..822 | CDD:275380 | 7/41 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |