Sequence 1: | NP_001036303.2 | Gene: | CG42346 / 3355160 | FlyBaseID: | FBgn0259677 | Length: | 1817 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001116240.1 | Gene: | Lrrc8d / 231549 | MGIID: | 1922368 | Length: | 859 | Species: | Mus musculus |
Alignment Length: | 1115 | Identity: | 213/1115 - (19%) |
---|---|---|---|
Similarity: | 381/1115 - (34%) | Gaps: | 416/1115 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 258 PGTTAISLRSTLERISAPIHSLSIYDFDRSVTSLSQDV------FQPGVHIRHLQFSHSHLEALK 316
Fly 317 DNSLRNVRSSLESLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGLRISKLNMKG 381
Fly 382 NRLQGMPEHAFAGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRLSNNRIPTFYGDIQLATNN 446
Fly 447 ASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELM 511
Fly 512 SLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTI---GGVFSNLPQLREV---FLSENNILEL 570
Fly 571 PADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLD 635
Fly 636 NNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIE-------PQ 693
Fly 694 AFHTLENMQHI-NLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMW---- 753
Fly 754 -LKDNQLTRV-ERSFFADTP--------------QLGRLY----------LSDNKIRDIEKD--- 789
Fly 790 TFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGY--AFAKLKNLKSLDLSH 852
Fly 853 NPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDI---- 913
Fly 914 ------PNLRRLLL-----SHNNFSYAGSVGIMAGMLDRLRSLQQLSMSN--CSLGQIPDLLFAK 965
Fly 966 NTNLVRLDLCDN--RLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLA 1028
Fly 1029 SIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVH 1093
Fly 1094 LSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSKDFE 1158
Fly 1159 AFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKD 1223
Fly 1224 LEEFSVDLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLR 1288
Fly 1289 KNYFELVPLE 1298 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42346 | NP_001036303.2 | leucine-rich repeat | 303..325 | CDD:275380 | 7/21 (33%) |
LRR_8 | 325..384 | CDD:290566 | 5/58 (9%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 351..461 | CDD:275380 | 14/109 (13%) | ||
LRR_8 | 373..433 | CDD:290566 | 10/59 (17%) | ||
LRR_RI | 397..648 | CDD:238064 | 36/256 (14%) | ||
leucine-rich repeat | 399..422 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 462..485 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 465..520 | CDD:290566 | 10/54 (19%) | ||
leucine-rich repeat | 486..509 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 508..567 | CDD:290566 | 10/64 (16%) | ||
leucine-rich repeat | 510..533 | CDD:275380 | 2/22 (9%) | ||
LRR_RI | 527..785 | CDD:238064 | 45/301 (15%) | ||
leucine-rich repeat | 534..556 | CDD:275380 | 3/24 (13%) | ||
LRR_8 | 555..613 | CDD:290566 | 5/60 (8%) | ||
leucine-rich repeat | 557..580 | CDD:275380 | 4/25 (16%) | ||
leucine-rich repeat | 581..604 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 604..663 | CDD:290566 | 9/58 (16%) | ||
leucine-rich repeat | 605..628 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 629..652 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 652..711 | CDD:290566 | 8/66 (12%) | ||
leucine-rich repeat | 653..676 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 677..700 | CDD:275380 | 3/29 (10%) | ||
leucine-rich repeat | 701..748 | CDD:275380 | 8/47 (17%) | ||
leucine-rich repeat | 725..736 | CDD:275378 | 2/10 (20%) | ||
leucine-rich repeat | 749..772 | CDD:275380 | 9/42 (21%) | ||
LRR_8 | 771..831 | CDD:290566 | 17/86 (20%) | ||
leucine-rich repeat | 773..793 | CDD:275380 | 9/32 (28%) | ||
LRR_RI | 804..1076 | CDD:238064 | 73/292 (25%) | ||
LRR_8 | 821..903 | CDD:290566 | 23/83 (28%) | ||
leucine-rich repeat | 821..844 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 845..868 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 869..892 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 893..915 | CDD:275380 | 3/31 (10%) | ||
leucine-rich repeat | 916..944 | CDD:275380 | 11/32 (34%) | ||
leucine-rich repeat | 945..968 | CDD:275380 | 4/24 (17%) | ||
LRR_8 | 967..1027 | CDD:290566 | 21/61 (34%) | ||
leucine-rich repeat | 969..992 | CDD:275380 | 4/24 (17%) | ||
leucine-rich repeat | 993..1014 | CDD:275380 | 8/20 (40%) | ||
LRR_8 | 1015..1075 | CDD:290566 | 12/59 (20%) | ||
leucine-rich repeat | 1017..1040 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 1041..1064 | CDD:275380 | 2/22 (9%) | ||
LRR_RI | <1047..1244 | CDD:238064 | 40/196 (20%) | ||
LRR_8 | 1063..1125 | CDD:290566 | 15/61 (25%) | ||
leucine-rich repeat | 1089..1114 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 1115..1162 | CDD:275380 | 6/46 (13%) | ||
LRR_8 | 1163..1219 | CDD:290566 | 13/55 (24%) | ||
leucine-rich repeat | 1163..1186 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 1187..1210 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 1211..1233 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 1234..1257 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 1235..1292 | CDD:290566 | 10/56 (18%) | ||
leucine-rich repeat | 1258..1279 | CDD:275380 | 2/20 (10%) | ||
leucine-rich repeat | 1282..1306 | CDD:275380 | 4/17 (24%) | ||
Lrrc8d | NP_001116240.1 | Pannexin_like | 1..385 | CDD:403656 | 74/512 (14%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 110..138 | 8/35 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 222..252 | 5/41 (12%) | |||
inl_like_NEAT_1 | <457..>703 | CDD:411101 | 76/313 (24%) | ||
LRR 1 | 515..535 | 9/20 (45%) | |||
leucine-rich repeat | 516..537 | CDD:275378 | 10/30 (33%) | ||
LRR 2 | 539..560 | 2/20 (10%) | |||
LRR 3 | 562..583 | 10/29 (34%) | |||
leucine-rich repeat | 563..590 | CDD:275380 | 13/35 (37%) | ||
LRR 4 | 590..610 | 3/19 (16%) | |||
leucine-rich repeat | 591..613 | CDD:275380 | 3/21 (14%) | ||
LRR | 597..>826 | CDD:227223 | 71/330 (22%) | ||
LRR 5 | 613..633 | 4/20 (20%) | |||
leucine-rich repeat | 614..629 | CDD:275380 | 3/14 (21%) | ||
LRR 6 | 637..658 | 10/22 (45%) | |||
leucine-rich repeat | 638..660 | CDD:275380 | 10/23 (43%) | ||
LRR 7 | 660..681 | 7/43 (16%) | |||
leucine-rich repeat | 661..685 | CDD:275380 | 8/46 (17%) | ||
LRR 8 | 685..706 | 4/21 (19%) | |||
leucine-rich repeat | 686..708 | CDD:275380 | 5/22 (23%) | ||
LRR 9 | 708..729 | 6/23 (26%) | |||
leucine-rich repeat | 709..731 | CDD:275380 | 6/24 (25%) | ||
LRR 10 | 731..752 | 5/37 (14%) | |||
leucine-rich repeat | 732..754 | CDD:275380 | 6/46 (13%) | ||
LRR 11 | 754..775 | 9/44 (20%) | |||
leucine-rich repeat | 755..777 | CDD:275380 | 9/45 (20%) | ||
LRR 12 | 777..798 | 7/21 (33%) | |||
leucine-rich repeat | 778..800 | CDD:275380 | 8/21 (38%) | ||
LRR 13 | 800..821 | 7/42 (17%) | |||
leucine-rich repeat | 801..821 | CDD:275380 | 7/41 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |