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Protein Alignment CG42346 and lrrc32.1

DIOPT Version :9

Sequence 1:	NP_001036303.2	Gene:	CG42346 / 3355160	FlyBaseID:	FBgn0259677	Length:	1817	Species:	Drosophila melanogaster
Sequence 2:	XP_004912272.1	Gene:	lrrc32.1 / 100489763	XenbaseID:	XB-GENE-994459	Length:	666	Species:	Xenopus tropicalis

Alignment Length:	780	Identity:	188/780 - (24%)
Similarity:	310/780 - (39%)	Gaps:	231/780 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   460 PSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMS-------- 516
            |.:..||||.|....|..|....:..|::|...:||:..:||.:|:.:.:|..:::|
Frog    50 PGIQTLDLSHNDLENITEDHLMKYSFLESLDLSSNQLSFIQPHSFRKMHKLKEINLSGNDLDSFV 114

  Fly   517 HNRI--IGLDPKVFEKNKRLQTVDLSHNHIHT--IGGVFSNLPQLREVFLSENNILELPADAFTN 577
            |:|:  ||:.|.|       ||:|||.|.::.  ||......|:|:.:.|.||:|..:.:|.|..
Frog   115 HHRVSGIGVLPYV-------QTLDLSRNSLYNDMIGYFLQEAPRLQYLSLHENSITTISSDLFQG 172

  Fly   578 STNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDL 642
            |                                     ||           |..:.|.||.|.|:
Frog   173 S-------------------------------------PL-----------LAEVDLHNNIIMDI 189

  Fly   643 EIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLEN-----MQ 702
            |.|.|..|:||..:.|..|.|..:  ..|. |..|:.|::.||||     :.|||.::     ::
Frog   190 EEGSFEYLKHLSMIDLSMNSITCI--SDFN-LRQLKVLNLSKNSI-----KTFHTPDSEDEYLLE 246

  Fly   703 HINLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFF 767
            .::|..|:|:....: |..| :::.:.|..||:| :...|......    |:        ..||
Frog   247 KVDLSHNKLSSFPQL-PRVN-NVIFIDLSKNYIH-LGTETPGEDPD----WM--------NYSF- 295

  Fly   768 ADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIE 832
                   :|...:...::|   :.|.|..|..||||.|.::.:..|:|..:..|..|:|::|.|:
Frog   296 -------QLEFEEQNPKNI---STVPLPKLNHLDLSYNSIKSIPDDFFLTMPSLTFLNLSKNCIQ 350

  Fly   833 AIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFP-LNSLNLGNCSLRKLEQHAFKSLTNLNEL 896
            .:....|:.|.:|.:||||.|.:..|:  :.:|..| |..|.|.:..||.||...|:.|.::..|
Frog   351 VLSLGHFSGLSSLATLDLSANSIQNLS--LGANSLPSLQRLYLQHNQLRLLEPRIFQRLESIVLL 413

  Fly   897 NLERNQLNPA-----------------DIQTLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRL-- 942
            :|:.|.:.|.                 .::..:||.|:.|.|..|             |:.|:
Frog   414 HLQGNHVGPCMAGLGKAKRRTHAEEYRCVEFFNIPTLQHLNLREN-------------MIQRIPA 465

  Fly   943 -----RSLQQLSMS-NCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRN--IFSGLNVFKELRLC 999
                 .||:.|.:| |..:...|:.||.....|..|.:..|.|..:|.:  :|:.|   |.|.|.
Frog   466 SAFWGTSLKVLDLSMNLGIKVKPNALFGLEKTLEVLFMEGNGLPSLNVDLPLFTHL---KYLNLS 527

  Fly  1000 RNELSDFPHIALYNLS-TLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLT 1063
            .|:||:.|.   :|.. .||:|||:.|....         |.:..:.:.:|.:..||
Frog   528 GNQLSELPE---WNSDCRLETLDLSLNSFTG---------LEVSNIPVLENTLKTLS-------- 572

  Fly  1064 QLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRI 1128
                  |.||.|......::.|.|.               .:|::.|:      ||.|...|:::
Frog   573 ------LYGNPLSCCANTWISHMIR---------------RTAVTIVA------LNATTCNISKL 610

  Fly  1129 Y---TVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLV---------------NNRITR 1175
            |   .:.|:..|     .||:        ||::....:..|.||               .||::|
Frog   611 YEGEMLVEQMDP-----DICE--------KDWKKVNVIVTLVLVLLVIAIGICFFFCFCRNRLSR 662

Fly 1176 1175
Frog 663 662

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.