DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and lrrc32

DIOPT Version :9

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:XP_001920576.2 Gene:lrrc32 / 100148867 ZFINID:ZDB-GENE-090630-1 Length:659 Species:Danio rerio


Alignment Length:720 Identity:187/720 - (25%)
Similarity:288/720 - (40%) Gaps:198/720 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 LPSLI-FLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIG 522
            |||.| .||||.|....:......:...|:.|..:.|||:.:||..|:.|..|..||:|.|    
Zfish    48 LPSSIRLLDLSQNLLQNLTLQDLPSRSSLRRLDLHHNQIQFLQPGLFRDLLHLEDLDLSGN---- 108

  Fly   523 LDPKVFEKNKRLQTVDLSHNHIHTIGGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLE 587
                         .:|| :..:||..|   .||.||.:.||.|.:       ||:.::    |..
Zfish   109 -------------ALDL-YAALHTPLG---PLPALRRLDLSGNGL-------FTDMSD----YFL 145

  Fly   588 SNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEH 652
            |:|.|                                    ||:||||.|.|..:....|...:.
Zfish   146 SDAPA------------------------------------LTNLSLDGNSITKISRTTFNGSQA 174

  Fly   653 LREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEP----------------QAFHTLE-- 699
            |:.:.||||.|..:..|.||.|..|.||.:..|||..|..                ..|.:|:  
Zfish   175 LQNIDLHNNVIIEIEEGAFEFLTELSELDLSVNSISCITDFNLVQLRTLNLSRNSLTNFQSLDME 239

  Fly   700 ---NMQHINLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVH-----PRTFSRQQKVQIMWLKD 756
               .:||::|::|:|... .:.|..| .|:.:.|..|.|..|:     ....|.::...::...|
Zfish   240 DEFQLQHLDLRENKLLYF-PVLPQRN-RLMYLDLSRNLLRSVNCSGPLEELESLRESGYLLTAHD 302

  Fly   757 NQLTRV--ERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQ 819
            ..||..  ||.     .:||||.                     :||||.|||:.|...:|:.:.
Zfish   303 KPLTLCANERQ-----QELGRLL---------------------YLDLSFNQLKTLSSSFFSSMA 341

  Fly   820 DLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFS-NEFP-LNSLNLGNCSLRKL 882
            .||.|:::.|   .::.::...|::||:||||.|.|..|:   || ...| |..|.|...:|..|
Zfish   342 ALESLNISNN---CLQSFSVDSLRSLKTLDLSFNNLQNLS---FSGGALPALEVLLLQGNALHLL 400

  Fly   883 EQHAFKSLTNLNELNLERN--------QLNPADIQTLDIPNLRRLLLSHNNFSYAGSVGIMAGML 939
            :.|.|.||.::..|:|::|        |::...:...|||:|..|.||.|               
Zfish   401 DAHIFSSLPSIRSLHLQQNLLSICADPQISSGCVHLSDIPSLTYLYLSEN--------------- 450

  Fly   940 DRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLNV-FKELRLCRNEL 1003
                          ||..|||..| |.:.|:.|||..|....|.....||:.. ...|.|..|:|
Zfish   451 --------------SLSSIPDGAF-KGSPLLILDLSLNPGVDITAASLSGVETSLTHLSLRGNQL 500

  Fly  1004 SDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALS------------- 1055
            ... .|.......|.|||::.|:|:.:..:....::.:  |.|::|::.||.             
Zfish   501 HSL-SIDFRVFQKLRSLDVSVNRLSGVSPWSEDSSVEI--LNLQNNRVEALGSALLQGRLRTLYV 562

  Fly  1056 GFNAV----NLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFL-QIPSSALSDVSIPRL 1115
            |:|.:    |...||.:......:..|.|....:|.::::|.:|.:..| ::.|||.|     |:
Zfish   563 GWNPLSCCRNPQLLDLLQQERLHVPDLAAATCWYSGDVEQVEVSVSAALPELCSSADS-----RV 622

  Fly  1116 SWLNL 1120
            .|::|
Zfish   623 LWVSL 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380 1/1 (100%)
LRR_8 373..433 CDD:290566
LRR_RI 397..648 CDD:238064 49/189 (26%)
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 462..485 CDD:275380 6/23 (26%)
LRR_8 465..520 CDD:290566 19/54 (35%)
leucine-rich repeat 486..509 CDD:275380 9/22 (41%)
LRR_8 508..567 CDD:290566 17/58 (29%)
leucine-rich repeat 510..533 CDD:275380 5/22 (23%)
LRR_RI 527..785 CDD:238064 68/285 (24%)
leucine-rich repeat 534..556 CDD:275380 6/21 (29%)
LRR_8 555..613 CDD:290566 12/57 (21%)
leucine-rich repeat 557..580 CDD:275380 7/22 (32%)
leucine-rich repeat 581..604 CDD:275380 4/22 (18%)
LRR_8 604..663 CDD:290566 14/58 (24%)
leucine-rich repeat 605..628 CDD:275380 0/22 (0%)
leucine-rich repeat 629..652 CDD:275380 9/22 (41%)
LRR_8 652..711 CDD:290566 23/79 (29%)
leucine-rich repeat 653..676 CDD:275380 10/22 (45%)
leucine-rich repeat 677..700 CDD:275380 9/43 (21%)
leucine-rich repeat 701..748 CDD:275380 13/51 (25%)
leucine-rich repeat 725..736 CDD:275378 3/10 (30%)
leucine-rich repeat 749..772 CDD:275380 5/24 (21%)
LRR_8 771..831 CDD:290566 17/59 (29%)
leucine-rich repeat 773..793 CDD:275380 4/19 (21%)
LRR_RI 804..1076 CDD:238064 79/299 (26%)
LRR_8 821..903 CDD:290566 29/91 (32%)
leucine-rich repeat 821..844 CDD:275380 5/22 (23%)
leucine-rich repeat 845..868 CDD:275380 11/23 (48%)
leucine-rich repeat 869..892 CDD:275380 9/22 (41%)
leucine-rich repeat 893..915 CDD:275380 6/29 (21%)
leucine-rich repeat 916..944 CDD:275380 5/27 (19%)
leucine-rich repeat 945..968 CDD:275380 7/22 (32%)
LRR_8 967..1027 CDD:290566 18/60 (30%)
leucine-rich repeat 969..992 CDD:275380 8/22 (36%)
leucine-rich repeat 993..1014 CDD:275380 5/20 (25%)
LRR_8 1015..1075 CDD:290566 16/76 (21%)
leucine-rich repeat 1017..1040 CDD:275380 6/22 (27%)
leucine-rich repeat 1041..1064 CDD:275380 8/39 (21%)
LRR_RI <1047..1244 CDD:238064 21/92 (23%)
LRR_8 1063..1125 CDD:290566 15/59 (25%)
leucine-rich repeat 1089..1114 CDD:275380 7/25 (28%)
leucine-rich repeat 1115..1162 CDD:275380 2/6 (33%)
LRR_8 1163..1219 CDD:290566
leucine-rich repeat 1163..1186 CDD:275380
leucine-rich repeat 1187..1210 CDD:275380
leucine-rich repeat 1211..1233 CDD:275380
leucine-rich repeat 1234..1257 CDD:275380
LRR_8 1235..1292 CDD:290566
leucine-rich repeat 1258..1279 CDD:275380
leucine-rich repeat 1282..1306 CDD:275380
lrrc32XP_001920576.2 LRR_RI 33..276 CDD:238064 79/297 (27%)
leucine-rich repeat 55..75 CDD:275380 5/19 (26%)
leucine-rich repeat 76..125 CDD:275380 20/69 (29%)
leucine-rich repeat 100..122 CDD:275380 10/42 (24%)
leucine-rich repeat 126..150 CDD:275380 10/34 (29%)
LRR_8 149..209 CDD:290566 24/95 (25%)
leucine-rich repeat 151..174 CDD:275380 9/22 (41%)
leucine-rich repeat 175..198 CDD:275380 10/22 (45%)
LRR_RI 198..453 CDD:238064 79/317 (25%)
leucine-rich repeat 199..219 CDD:275380 7/19 (37%)
leucine-rich repeat 220..243 CDD:275380 2/22 (9%)
leucine-rich repeat 266..318 CDD:275380 12/56 (21%)
leucine-rich repeat 288..310 CDD:275380 4/21 (19%)
LRR_8 318..374 CDD:290566 23/79 (29%)
leucine-rich repeat 319..342 CDD:275380 10/43 (23%)
leucine-rich repeat 343..363 CDD:275380 5/22 (23%)
LRR_8 362..421 CDD:290566 24/61 (39%)
leucine-rich repeat 387..410 CDD:275380 9/22 (41%)
leucine-rich repeat 411..441 CDD:275380 6/29 (21%)
leucine-rich repeat 442..463 CDD:275380 12/50 (24%)
leucine-rich repeat 465..489 CDD:275380 8/23 (35%)
leucine-rich repeat 490..512 CDD:275380 5/22 (23%)
leucine-rich repeat 513..534 CDD:275380 6/20 (30%)
leucine-rich repeat 535..555 CDD:275380 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

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