DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42346 and LRRC70

DIOPT Version :10

Sequence 1:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster
Sequence 2:NP_852607.3 Gene:LRRC70 / 100130733 HGNCID:35155 Length:622 Species:Homo sapiens


Alignment Length:692 Identity:165/692 - (23%)
Similarity:271/692 - (39%) Gaps:191/692 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 SNLPQL---REVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSN 613
            |::.||   |::......:..:|.: |..||  ..:||..|.|::|:.:..:.|.:|..||    
Human    33 SSVCQLCTGRQINCRNLGLSSIPKN-FPEST--VFLYLTGNNISYINESELTGLHSLVALY---- 90

  Fly   614 FIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQ 678
                                |||:.|..:....|.:|.||..:.|:||.|:|:..|:|:.|.:|:
Human    91 --------------------LDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLR 135

  Fly   679 ELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTF 743
            .|::|.|.:..:....|:.|.::|::|||.|:||||..                        .||
Human   136 NLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGS------------------------GTF 176

  Fly   744 SRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLR 808
            .....::|:.|.:|.:.|:..|.|.....|..|||..|.:..:..:.|             ..|:
Human   177 VGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAF-------------EVLK 228

  Fly   809 QLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLN 873
            .|||           |||:.|.||||:.:||..|.||:.|.|.::.:..:|||.||....|..|.
Human   229 SLRR-----------LSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLI 282

  Fly   874 LGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDI--PNLRRLLLSHNNFSYAGSVGIMA 936
            |.:..|..|....|..|.||..|.|:||::...|..|.:.  .:|:.|.||.||.:     .:..
Human   283 LSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLT-----ALHP 342

  Fly   937 GMLDRLRSLQQLSMS------NCSLGQIPDLLFAKNTNLVRLDL-CDN---------RLTQINRN 985
            .:|..|.||..|..:      ||.|..:.|.|   .::.:.|:: |.|         |...|...
Human   343 RVLKPLSSLIHLQANSNPWECNCKLLGLRDWL---ASSAITLNIYCQNPPSMRGRALRYINITNC 404

  Fly   986 IFSGLNVFKELRLCRNELSDFPHI-----AL---YNLSTLESLDLARNQLASIDFFK-------- 1034
            :.|.:||.:...:.::     |||     ||   ::..|.....|...:..:|.|::        
Human   405 VTSSINVSRAWAVVKS-----PHIHHKTTALMMAWHKVTTNGSPLENTETENITFWERIPTSPAG 464

  Fly  1035 -------------------------LSGTLNLRQLILRDNKITALSGFNAVNLTQ-LDSVDLSGN 1073
                                     .|.||||.:.....|...::||..::..|| ::.::.:.:
Human   465 RFFQENAFGNPLETTAVLPVQIQLTTSVTLNLEKNSALPNDAASMSGKTSLICTQEVEKLNEAFD 529

  Fly  1074 LLLSLPANFLRHSINL-----------QKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINR 1127
            :||   |.|:...:.:           ||:..|.|.    ..:.|...|..:.:..|:|.:    
Human   530 ILL---AFFILACVLIIFLIYKVVQFKQKLKASENS----RENRLEYYSFYQSARYNVTAS---- 583

  Fly  1128 IYTVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLV 1169
                            ||.|:.:.|.|...|  |...|..:|
Human   584 ----------------ICNTSPNSLESPGLE--QIRLHKQIV 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42346NP_001036303.2 LRR <301..606 CDD:443914 14/56 (25%)
leucine-rich repeat 303..325 CDD:275380
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 462..485 CDD:275380
LRR 486..>736 CDD:443914 48/186 (26%)
leucine-rich repeat 486..509 CDD:275380
leucine-rich repeat 510..533 CDD:275380
leucine-rich repeat 534..556 CDD:275380 1/3 (33%)
leucine-rich repeat 557..580 CDD:275380 5/25 (20%)
leucine-rich repeat 581..604 CDD:275380 6/22 (27%)
leucine-rich repeat 605..628 CDD:275380 3/22 (14%)
PPP1R42 627..860 CDD:455733 64/232 (28%)
leucine-rich repeat 629..652 CDD:275380 6/22 (27%)
leucine-rich repeat 653..676 CDD:275380 9/22 (41%)
leucine-rich repeat 677..700 CDD:275380 6/22 (27%)
leucine-rich repeat 701..748 CDD:275380 11/46 (24%)
leucine-rich repeat 725..736 CDD:275378 0/10 (0%)
leucine-rich repeat 749..772 CDD:275380 6/22 (27%)
leucine-rich repeat 773..793 CDD:275380 6/19 (32%)
leucine-rich repeat 821..844 CDD:275380 11/22 (50%)
leucine-rich repeat 845..868 CDD:275380 8/22 (36%)
LRR 869..1226 CDD:443914 79/372 (21%)
leucine-rich repeat 869..892 CDD:275380 7/22 (32%)
leucine-rich repeat 893..915 CDD:275380 7/23 (30%)
leucine-rich repeat 916..944 CDD:275380 8/27 (30%)
leucine-rich repeat 945..968 CDD:275380 7/28 (25%)
leucine-rich repeat 969..992 CDD:275380 6/32 (19%)
leucine-rich repeat 993..1014 CDD:275380 5/28 (18%)
leucine-rich repeat 1017..1040 CDD:275380 5/55 (9%)
leucine-rich repeat 1041..1064 CDD:275380 4/22 (18%)
leucine-rich repeat 1089..1114 CDD:275380 6/35 (17%)
leucine-rich repeat 1115..1162 CDD:275380 8/46 (17%)
PPP1R42 1155..1317 CDD:455733 4/15 (27%)
leucine-rich repeat 1163..1186 CDD:275380 2/7 (29%)
leucine-rich repeat 1187..1210 CDD:275380
leucine-rich repeat 1211..1233 CDD:275380
leucine-rich repeat 1234..1257 CDD:275380
leucine-rich repeat 1258..1279 CDD:275380
leucine-rich repeat 1282..1306 CDD:275380
LRRC70NP_852607.3 LRRNT 31..59 CDD:396168 5/26 (19%)
LRR 49..>383 CDD:443914 114/416 (27%)
LRR 1 61..82 7/22 (32%)
leucine-rich repeat 65..85 CDD:275380 6/19 (32%)
LRR 2 85..106 8/44 (18%)
leucine-rich repeat 86..109 CDD:275380 9/46 (20%)
LRR 3 109..130 9/20 (45%)
leucine-rich repeat 110..133 CDD:275380 9/22 (41%)
LRR 4 133..154 5/20 (25%)
leucine-rich repeat 134..157 CDD:275380 6/22 (27%)
LRR 5 157..178 11/44 (25%)
leucine-rich repeat 158..181 CDD:275380 11/46 (24%)
LRR 6 181..202 6/20 (30%)
leucine-rich repeat 182..205 CDD:275380 6/22 (27%)
LRR 7 205..226 6/33 (18%)
leucine-rich repeat 206..229 CDD:275380 7/35 (20%)
LRR 8 229..250 13/31 (42%)
leucine-rich repeat 230..253 CDD:275380 14/33 (42%)
LRR 9 253..274 8/20 (40%)
leucine-rich repeat 254..277 CDD:275380 8/22 (36%)
LRR 10 277..298 6/20 (30%)
leucine-rich repeat 278..301 CDD:275380 7/22 (32%)
LRR 11 301..322 8/20 (40%)
leucine-rich repeat 302..326 CDD:275380 7/23 (30%)
LRR 12 326..347 7/25 (28%)
leucine-rich repeat 327..348 CDD:275380 7/25 (28%)
Blue background indicates that the domain is not in the aligned region.

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