DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-AGGG and ndufb2

DIOPT Version :10

Sequence 1:NP_001015476.1 Gene:ND-AGGG / 3355155 FlyBaseID:FBgn0058002 Length:94 Species:Drosophila melanogaster
Sequence 2:NP_001106529.1 Gene:ndufb2 / 100127720 XenbaseID:XB-GENE-1009607 Length:102 Species:Xenopus tropicalis


Alignment Length:102 Identity:31/102 - (30%)
Similarity:53/102 - (51%) Gaps:11/102 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFALRLGSSIGCFHRTILGRDIIQRKSHVVSYRNGPPPHSKATKIGALT---------VGGAMW 56
            ||..:|:|:::....|.|.|  :::.|..|.:...|.....:..:...||         :.|.||
 Frog     1 MSSLVRIGATLKTGGRLIAG--VVRNKPGVRNAGGGVHIEPRYRQFPELTKHQVRQAEILSGFMW 63

  Fly    57 WWVIWHLWHEPDHITGEFDYPNSRKWSNTELGVPKDG 93
            :|::|||||:.|.:.|.|.||:..:|::.|||:...|
 Frog    64 FWILWHLWHDTDAVLGHFPYPDPSEWTDEELGLSGGG 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-AGGGNP_001015476.1 NADH_B2 26..94 CDD:464329 24/77 (31%)
ndufb2NP_001106529.1 NADH_B2 34..101 CDD:464329 22/67 (33%)

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