DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and BARX2

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_003649.2 Gene:BARX2 / 8538 HGNCID:956 Length:279 Species:Homo sapiens


Alignment Length:284 Identity:71/284 - (25%)
Similarity:116/284 - (40%) Gaps:67/284 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 HHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEES---YRKLELNGNPPS------ 140
            |....|||...|:....::::          |.:.:|||  :|:   :.||.|....||      
Human     4 HAELRLSSPGQLKAARRRYKT----------FMIDEILS--KETCDYFEKLSLYSVCPSLVVRPK 56

  Fly   141 PFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGS 205
            |..|.:.|.|:.:...|:..|.........:..:||:..        :|:.|......||...|.
Human    57 PLHSCTGSPSLRAYPLLSVITRQPTVISHLVPATPGIAQ--------ALSCHQVTEAVSAEAPGG 113

  Fly   206 TANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELER 270
            .|          ::||.|.|               ....|.|   .:.|:.|.:||:.|:..||:
Human   114 EA----------LASSESET---------------EQPTPRQ---KKPRRSRTIFTELQLMGLEK 150

  Fly   271 RFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAV 335
            :|::|:|||.|:|..||..:.||..|||.|:||.|.|.|:...:   ..|....:|...|::.::
Human   151 KFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK---GGQEAPTKPKGRPKKNSI 212

  Fly   336 PV---LVKDGKPCSGNNSSSQSQQ 356
            |.   :..:.|    .||.:|.|:
Human   213 PTSEEIEAEEK----MNSQAQGQE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 26/55 (47%)
BARX2NP_003649.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..137 9/54 (17%)
Homeodomain 134..190 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..279 9/46 (20%)

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