Protein Alignment scro and HB18

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_177248.3
• Gene: HB18 / 843431
• AraportID: AT1G70920
• Length: 206
• Species: Arabidopsis thaliana
• Alignment Length: 141
• Identity: 34/141 - (24%)
• Similarity: 67/141 - (47%)
• Gaps: 23/141 - (16%)

  Fly   253 RRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEK-- 315
            ||::::..|:.|.:.||..|.|...|:..:::.||:.:.|:..||::||||.|.:.|.:..|.
plant    66 RRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMEC 130

  Fly   316 --------AMAEQNQHNQ----------PASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNST 362
                    ::.|||:..|          |:|:.   |:.:..:..:.....::.|.:.|.|...:
plant   131 EYLKRWFGSLKEQNRRLQIEVEELRALKPSSTS---ALTMCPRCERVTDAVDNDSNAVQEGAVLS 192

  Fly   363 SAGNNTGSANN 373
            |....|.|:::
plant   193 SRSRMTISSSS 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	18/55 (33%)
HB18	NP_177248.3	HOX	66..122	CDD:197696	19/55 (35%)
		HALZ	124..167	CDD:128634	8/45 (18%)