Protein Alignment scro and HB5

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_201334.1
• Gene: HB5 / 836656
• AraportID: AT5G65310
• Length: 312
• Species: Arabidopsis thaliana
• Alignment Length: 327
• Identity: 68/327 - (20%)
• Similarity: 107/327 - (32%)
• Gaps: 94/327 - (28%)

  Fly   143 RSNSSSSSINS-----PGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASW 202
            ||..||.|::.     ..|........|...|.||               |.||.|:.|.::...
plant     3 RSRGSSDSLSGFLPIRHSTTDKQISPRPTTTGFLY---------------SGAGDYSQMFDALED 52

  Fly   203 YGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYE 267
            .||..:                 :..:|:.|..||               .:|||:  ...||..
plant    53 DGSLED-----------------LGGVGHASSTAA---------------EKKRRL--GVEQVKA 83

  Fly   268 LERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNH--RYKCKRQAKEKAMAEQN----QHNQP 326
            ||:.|:....|....:..||..:.|.|.||.|||||.  |:|.|:..::..:.:.|    :.|:.
plant    84 LEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRD 148

  Fly   327 ASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVSVTANVSGGL 391
            :......::...:|:.|...........:::|.......|.:..|||     .::.::.......
plant   149 SLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALKAVEANQSVMANN-----EVLELSHRSPSPP 208

  Fly   392 NLITGDAPNSH---------------------SPDTSSSLLASY--------GTVGGSNVAMLQQ 427
            ..|..|||.|.                     |.|:|:.|...|        |.|..:.|.|...
plant   209 PHIPTDAPTSELAFEMFSIFPRTENFRDDPADSSDSSAVLNEEYSPNTVEAAGAVAATTVEMSTM 273

  Fly   428 PC 429
            .|
plant   274 GC 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	22/57 (39%)
HB5	NP_201334.1	Homeodomain	72..125	CDD:459649	21/54 (39%)
		HALZ	127..168	CDD:460477	5/40 (13%)