Protein Alignment scro and HB-3

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_568309.2
• Gene: HB-3 / 831367
• AraportID: AT5G15150
• Length: 314
• Species: Arabidopsis thaliana
• Alignment Length: 286
• Identity: 64/286 - (22%)
• Similarity: 99/286 - (34%)
• Gaps: 75/286 - (26%)

  Fly   172 YHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLA 236
            :|.|      .||...|...|.        :||...|   :.::|.||.:......|:...|...
plant    40 HHLP------SPTSLPSCPPHL--------FYGGGGN---YMMNRSMSFTGVSDHHHLTQKSPTT 87

  Fly   237 ACSVSDSKPL-----------QFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLI 290
            ..:::|...:           ...|.:::||..|   .||..||:.|:....|....:..||..:
plant    88 TNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNL---EQVRALEKSFELGNKLEPERKMQLAKAL 149

  Fly   291 HLTPTQVKIWFQNHRYKCKRQAKEK----------AMAEQNQ----HNQPASS--------PRRV 333
            .|.|.|:.|||||.|.:.|.:..|:          .:...|.    ||:...:        .|:.
plant   150 GLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKE 214

  Fly   334 AVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVSVTANVS---------- 388
            :..: .::....|.:|:.|....|..||:.|  |..|.......|.|.|.||..:
plant   215 SAKI-KREFAEASWSNNGSTENNHNNNSSDA--NHVSMIKDLFPSSIRSATATTTSTHIDHQIVQ 276

  Fly   389 ----GGLNLITG-DAPNSHS----PD 405
                |..|:..| |...|.|    ||
plant   277 DQDQGFCNMFNGIDETTSASYWAWPD 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	20/55 (36%)
HB-3	NP_568309.2	Homeodomain	115..168	CDD:459649	20/55 (36%)
		HALZ	170..208	CDD:460477	4/37 (11%)