Protein Alignment scro and HB-2

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_193411.1
• Gene: HB-2 / 827384
• AraportID: AT4G16780
• Length: 284
• Species: Arabidopsis thaliana
• Alignment Length: 232
• Identity: 47/232 - (20%)
• Similarity: 85/232 - (36%)
• Gaps: 79/232 - (34%)

  Fly   228 SLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKA------GR------------- 273
            ||::..||               :.:|.|.|.:....::||:..      ||
plant    64 SLLELTCQ---------------QQEIVVSALLIGAFVASLVGGSLIDLYGRRITIIFTSILLVF 113

  Fly   274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV-----LDEMVEKGLKPDVISYN- 332
            ||.:.:::            |:|..||.|..|...|.|.:.:     :.|:..:..:..::|.|
plant   114 SNLLPVVI------------VSYGSLIAGRIVIGVSISLSAIATCVYIAEISPQHKRGMLVSLNE 166

  Fly   333 --MILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK 395
              :::|:.|..    ...|||..:..        .::.:|     ||....||:....|.|....
plant   167 LMIVVGILFAY----ICNYLFASVSN--------GWKYMF-----GLIIPLAALQAIAMYFLPQS 214

  Fly   396 PRRDRLEGF-------LQKLCESGKL-EILSKVISSL 424
            ||...::|:       ||||..:..: |.|:.:.||:
plant   215 PRFLIMKGYDDAAGKVLQKLRATTNISEELTAIKSSI 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	15/74 (20%)
HB-2	NP_193411.1	HD-ZIP_N	8..107	CDD:461370	11/57 (19%)
		HOX	128..182	CDD:197696	10/57 (18%)
		HALZ	184..227	CDD:128634	10/55 (18%)