DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and HAT9

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_179865.1 Gene:HAT9 / 816811 AraportID:AT2G22800 Length:274 Species:Arabidopsis thaliana


Alignment Length:293 Identity:63/293 - (21%)
Similarity:112/293 - (38%) Gaps:54/293 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 GNPPSPFRSNSSSSSINSPGTLTTSTM--ANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRN 198
            |..|||..:|.:|       |:..|::  ..|.....|...|.|....| .|.|        .|.
plant    14 GLGPSPIPNNYNS-------TIRQSSVYKLEPSLTLCLSGDPSVTVVTG-ADQL--------CRQ 62

  Fly   199 SASWYGSTANDPRFAISRLMSSSASGTMSHMGNMS----GLAACSVSDSKPLQFPLAQRRKRRVL 259
            ::|..|.::    |:..|::.....|     |..|    .:....:||....:..::.|:|.|: 
plant    63 TSSHSGVSS----FSSGRVVKRERDG-----GEESPEEEEMTERVISDYHEDEEGISARKKLRL- 117

  Fly   260 FTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKE---------- 314
             |:.|...||..||....|:..:::.||..::|.|.||::||||.|.:.|.:..|          
plant   118 -TKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCC 181

  Fly   315 KAMAEQN---QHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNA 376
            :.:|::|   |.........::..|..:.  .|.|........::.|    ..|...|....|:.
plant   182 ETLADENIRLQKEIQELKTLKLTQPFYMH--MPASTLTKCPSCERIG----GGGGGNGGGGGGSG 240

  Fly   377 NSGIVSVTANVSGGLNLITGDAPNSHSPDTSSS 409
            .:.::...:...|..::  ...|:..:|.|:.|
plant   241 ATAVIVDGSTAKGAFSI--SSKPHFFNPFTNPS 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 20/55 (36%)
HAT9NP_179865.1 HOX 112..166 CDD:197696 21/55 (38%)
HALZ 168..211 CDD:128634 5/44 (11%)

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