Protein Alignment scro and HB6

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_565536.1
• Gene: HB6 / 816775
• AraportID: AT2G22430
• Length: 311
• Species: Arabidopsis thaliana
• Alignment Length: 300
• Identity: 64/300 - (21%)
• Similarity: 105/300 - (35%)
• Gaps: 80/300 - (26%)

  Fly   214 ISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQF-----------------PLAQRR------- 254
            :.||.||.:.|     |.:|.....|..:..|.::                 .:.:.|
plant     2 MKRLSSSDSVG-----GLISLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEERGHVGLSE 61

  Fly   255 -KRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNH--RYKCKRQAKE-- 314
             |||:...  ||..||:.|:.:..|....:..||..:.|.|.||.:||||.  |:|.|:..|:
plant    62 KKRRLSIN--QVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYG 124

  Fly   315 --KAMAEQNQHNQPASSPRRVAVPVLVKDGK---PCSGNNSSSQSQQHGTNSTSAGNNTGSANNG 374
              |...:..:||  ..|.||....:|.:..|   ..:|.....:.:::....|:..:.:......
plant   125 VLKTQYDSLRHN--FDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEV 187

  Fly   375 NANSGIVSVTANV------SGGLNL------------------ITGDAPNSHSPDTSSSL----- 410
            :....|....::.      |.|||.                  ....|.:|.|.|:|:.|
plant   188 SLPEKITEAPSSPPQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSSALLNEESS 252

  Fly   411 ----LASYGTVGGSN----VAMLQQPCNNTLMSNSLAMAY 442
                :|:..||.|.|    |.|.|...:...:|...|..:
plant   253 SNVTVAAPVTVPGGNFFQFVKMEQTEDHEDFLSGEEACEF 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	22/65 (34%)
HB6	NP_565536.1	Homeodomain	62..115	CDD:459649	20/54 (37%)
		HALZ	117..158	CDD:460477	10/42 (24%)