Protein Alignment scro and lbx1b

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001156784.1
• Gene: lbx1b / 793810
• ZFINID: ZDB-GENE-050309-27
• Length: 265
• Species: Danio rerio
• Alignment Length: 242
• Identity: 63/242 - (26%)
• Similarity: 89/242 - (36%)
• Gaps: 71/242 - (29%)

  Fly    84 AHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILS-PIEESYRKLELNGNPPSPFRSNSS 147
            |.....|:.:.||....|.::..       ||||:||||| |..:.:.::          ....:
Zfish    12 AMESRGLNPLDHLPPPASSNKPL-------TPFSITDILSKPTVKRFHRI----------HRLPA 59

  Fly   148 SSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRF 212
            |..:....|::..|:.                                          |...|..
Zfish    60 SDRVRQSITVSRQTLI------------------------------------------TQASPLC 82

  Fly   213 AISRLMSSSAS----GTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFK 273
            |:..|.|.:..    |.:.......||......||.      .:|||.|..||..|:||||:||.
Zfish    83 ALQELASKTFKGLELGVLQAAEGKDGLKLFGQRDSP------KKRRKSRTAFTNHQLYELEKRFL 141

  Fly   274 QQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKE-KAMAE 319
            .|:|||..:|:.:|..:.||..||..||||.|.|.||..:| ||..|
Zfish   142 HQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLKRDLEEMKADVE 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	28/55 (51%)
lbx1b	NP_001156784.1	Homeodomain	122..178	CDD:459649	28/55 (51%)