Protein Alignment scro and hmx4

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001038836.2
• Gene: hmx4 / 751654
• ZFINID: ZDB-GENE-060825-142
• Length: 238
• Species: Danio rerio
• Alignment Length: 222
• Identity: 60/222 - (27%)
• Similarity: 97/222 - (43%)
• Gaps: 27/222 - (12%)

  Fly   122 LSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDN 186
            :|..:.|.|...|.....:...|.:||.:.:|..:..:..:...   |.|:|....:..|....:
Zfish     1 MSKEDASCRPASLKFTIDNILNSKTSSRNFDSCHSRASLVVCRD---GCLHHPGESEDPCKEGSD 62

  Fly   187 LSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSK--PLQFP 249
            ..|  |..|..|..   |....|...|:. :.|.||.             :|..:..|  ..:..
Zfish    63 ARL--HGIDKLNRE---GDATVDALKAVD-MRSESAD-------------SCDDAQQKNNGKKNK 108

  Fly   250 LAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKE 314
            |..::|.|.:|::.|:::||..|..:||||:.||..||:.:.||.|||||||||.|.|.|||...
Zfish   109 LMTKKKTRTIFSKRQIFQLESTFDMKRYLSSAERACLANSLQLTETQVKIWFQNRRNKLKRQLST 173

  Fly   315 KAMAEQNQHNQPASSPRRVAVPVLVKD 341
            :.   :..:::.....:.|.:|.|.|:
Zfish   174 EL---EGPNSEFGDIGKTVPLPALYKE 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	28/55 (51%)
hmx4	NP_001038836.2	Homeodomain	115..169	CDD:459649	27/53 (51%)