Protein Alignment scro and nkx2.4b

DIOPT Version :9

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_571664.1
• Gene: nkx2.4b / 58112
• ZFINID: ZDB-GENE-000830-1
• Length: 307
• Species: Danio rerio
• Alignment Length: 329
• Identity: 151/329 - (45%)
• Similarity: 186/329 - (56%)
• Gaps: 56/329 - (17%)

  Fly   112 HSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSP---------GTLTTSTMANPYA 167
            |||||||:||||||||:::|          |.:..||:|:.||         ..|...:|::
Zfish     7 HSTPFSVSDILSPIEETFKK----------FAAMESSASLASPLYRQSQVSQANLQQHSMSH--- 58

  Fly   168 MGTLYHSPGVQ-------TYCGPTDNL--SLAGHYTDMRNSA---SWYGSTANDPRF-AISRLMS 219
              ..||.|..|       .||..|...  .|..:...|||.|   :||||.. :||: .|||.|.
Zfish    59 --NAYHMPHSQFSHSTMGGYCNGTIGAMGDLPSYQESMRNGATATAWYGSNP-EPRYPTISRFMG 120

  Fly   220 SSASGTMSHMGNMSGLAACSVSDSKPL-QFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPER 283
            .||.   .:||.:.|:.|     ||.: ....|.||||||||:||||||||||||||:|||||||
Zfish   121 PSAG---MNMGTLPGMDA-----SKSMVTLHAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPER 177

  Fly   284 EHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPA-SSPRRVAVPVLVKDGKPCSG 347
            |||||:||||||||||||||||||.|||||:||..:|:..|..| .||||||:||||||||||.
Zfish   178 EHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKASQQQDSGNMCAQQSPRRVALPVLVKDGKPCQ- 241

  Fly   348 NNSSSQSQQHGTNSTSAGNNT-GSANNGNANSGIVSVTANVSGGLNLITGDAPNSHSPDTSSSLL 411
            |.|.:.:..|....:..|:.| .||.:...    :|.:..:.|||:..........|...||:||
Zfish   242 NGSGTPTPIHQQVQSVLGSETLASAEDLEE----MSPSPPLMGGLSQTDAALIEYTSSMVSSNLL 302

  Fly   412 ASYG 415
              ||
Zfish   303 --YG 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeobox	256..309	CDD:278475	49/52 (94%)
nkx2.4b	NP_571664.1	Homeobox	150..203	CDD:278475	49/52 (94%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170576026
Domainoid	1	1.000	114	1.000	Domainoid score	I6020
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	224	1.000	Inparanoid score	I3491
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1348801at2759
OrthoFinder	1	1.000	-	-		FOG0002967
OrthoInspector	1	1.000	-	-		otm24364
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24340
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2571
SonicParanoid	1	1.000	-	-		X524
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	10	10.030