Protein Alignment scro and hoxa4a

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_571610.1
• Gene: hoxa4a / 58050
• ZFINID: ZDB-GENE-000823-4
• Length: 245
• Species: Danio rerio
• Alignment Length: 278
• Identity: 69/278 - (24%)
• Similarity: 103/278 - (37%)
• Gaps: 72/278 - (25%)

  Fly   105 STLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMG 169
            |.|.|||:..|     ...|.||.::    ||..|.   |:........||.        |:...
Zfish     5 SYLINSNYIEP-----SFPPCEEYHQ----NGYMPV---SSDYYERPKDPGF--------PHHEE 49

  Fly   170 TLYHSPGVQTYCGPTDNLSL--AGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNM 232
            ..|.....|.......|:|.  ...::|..::.....|..:.|     ||.:.|..|:
Zfish    50 ASYPRSNYQEQSYDYGNVSTNDLNDFSDRHHAQPQSVSQNHGP-----RLTTESCVGS------- 102

  Fly   233 SGLAACS-VSDS--------KPLQFPLAQR---------------RKRRVLFTQAQVYELERRFK 273
            .|...|| |||:        :|:.:|..::               ::.|..:|:.|..|||:.|.
Zfish   103 DGNKDCSLVSDALPGSQKSKEPVVYPWMKKVHVNTVTASYSGGVPKRSRTAYTRQQALELEKEFH 167

  Fly   274 QQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAK-------EKAMAEQNQH-NQPASSP 330
            ..|||:...|..:|..:.|:..||||||||.|.|.|:..|       ..:.|..|.| ...|:..
Zfish   168 FNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPNTKIRSSSSAPSNHHVKTDATQQ 232

  Fly   331 RRVAVPVLVKDGKPCSGN 348
            ::..:|.      |||.|
Zfish   233 QQTLLPT------PCSSN 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	23/55 (42%)
hoxa4a	NP_571610.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	34..99		12/77 (16%)
		Antp-type hexapeptide	126..131		1/4 (25%)
		Homeodomain	148..204	CDD:459649	23/55 (42%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	205..245		10/46 (22%)